Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.6□□□□□ -1.83
SRRM4A7MD48 AC091953.3-201ENST00000623220 236 ntBASIC3.6□□□□□ -1.83
SRRM4A7MD48 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.6□□□□□ -1.83
SRRM4A7MD48 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SRRM4A7MD48 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 SEPT7P7-201ENST00000420492 1301 ntBASIC3.6□□□□□ -1.83
SRRM4A7MD48 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.6□□□□□ -1.83
SRRM4A7MD48 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRRM4A7MD48 AC117529.2-201ENST00000512159 2068 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRRM4A7MD48 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRRM4A7MD48 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRRM4A7MD48 NOL8P1-201ENST00000508336 3529 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRRM4A7MD48 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRRM4A7MD48 OR52B1P-201ENST00000316506 909 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 RNA5SP307-201ENST00000362863 116 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 snoZ40.1-201ENST00000364540 72 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 RNA5SP22-201ENST00000365393 109 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 MIR506-201ENST00000384998 124 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 SNORD65.1-201ENST00000390889 71 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 FCF1P2-201ENST00000415284 583 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC004690.1-201ENST00000418216 328 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 RPS12P23-201ENST00000419579 400 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 MRPS36P1-201ENST00000421291 307 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 MTCO3P1-205ENST00000422088 832 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 MTCO2P17-201ENST00000424336 677 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 MTCO2P23-201ENST00000425216 680 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 CENPIP1-201ENST00000425713 902 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL360081.1-201ENST00000428299 555 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL049745.1-201ENST00000433953 286 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 VN1R25P-201ENST00000443385 738 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL606517.1-201ENST00000446914 387 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 DDX39BP2-208ENST00000453923 258 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 RPL37P6-202ENST00000464216 403 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC083982.1-201ENST00000485679 344 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 MTCYBP16-201ENST00000509187 1129 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 IGKV1-32-201ENST00000519290 311 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC100770.1-201ENST00000532310 322 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AP000619.3-201ENST00000535634 1127 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 SULT1C2P1-202ENST00000562418 459 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC016877.3-201ENST00000606778 504 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL513477.2-201ENST00000607858 568 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC005332.6-201ENST00000613178 446 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC009237.17-201ENST00000618111 748 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AL049536.1-201ENST00000625043 744 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC006065.6-201ENST00000625201 545 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC008993.2-201ENST00000631744 806 ntBASIC3.59□□□□□ -1.83
SRRM4A7MD48 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.59□□□□□ -1.83
SRRM4A7MD48 AC000123.3-201ENST00000624029 4975 ntBASIC3.59□□□□□ -1.84
SRRM4A7MD48 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.59□□□□□ -1.84
SRRM4A7MD48 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SRRM4A7MD48 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SRRM4A7MD48 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
SRRM4A7MD48 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.58□□□□□ -1.84
SRRM4A7MD48 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 MTND5P3-201ENST00000438536 1800 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.58□□□□□ -1.84
SRRM4A7MD48 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.58□□□□□ -1.84
SRRM4A7MD48 AC125257.1-201ENST00000560400 2930 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 AL133412.1-201ENST00000380194 2992 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SRRM4A7MD48 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRRM4A7MD48 OR4A15-201ENST00000314706 1035 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
SRRM4A7MD48 RNU1-130P-201ENST00000363930 160 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 SNORD113.2-201ENST00000364166 89 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 SNORA70F-201ENST00000384142 135 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 RNU6-1226P-201ENST00000384317 107 ntBASIC3.58□□□□□ -1.84
SRRM4A7MD48 SNORA40.2-201ENST00000390847 128 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms