Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 RNVU1-4-201ENST00000612985 164 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 MFSD8-236ENST00000641509 4050 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 PWAR6-201ENST00000552334 4618 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 MIR124-3-201ENST00000384866 87 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC068533.1-201ENST00000418542 415 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 OR6C72P-201ENST00000451403 892 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 RPL23AP12-201ENST00000467573 473 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC012170.1-201ENST00000495139 359 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC023050.1-201ENST00000498198 304 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 DUXAP6-201ENST00000553858 601 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 MIR6810-201ENST00000622701 70 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC004943.3-201ENST00000624116 600 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AP003072.4-201ENST00000624580 310 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC016717.3-201ENST00000624730 554 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 AC092159.4-201ENST00000624944 550 ntBASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS29Q9UBQ0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
VPS29Q9UBQ0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS29Q9UBQ0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 U8.11-201ENST00000384699 133 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 U8.12-201ENST00000384701 133 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 MIR320B1-201ENST00000390209 79 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC007066.1-201ENST00000392902 381 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC240504.1-201ENST00000395709 845 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 CASKP1-201ENST00000412870 582 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 HMGB3P5-201ENST00000428894 612 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 RPS26P40-201ENST00000435209 294 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 U8.18-201ENST00000459285 133 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC007688.1-201ENST00000475592 759 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 Vault.1-201ENST00000516474 102 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 MIR4697-201ENST00000582977 78 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC067852.4-201ENST00000590314 478 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AL391497.1-201ENST00000608671 547 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AL589935.2-201ENST00000616471 1231 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS29Q9UBQ0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP280-201ENST00000364196 304 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 RNA5SP515-201ENST00000364570 118 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 RNA5SP51-201ENST00000364750 119 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 AL590704.1-201ENST00000402856 794 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS29Q9UBQ0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms