Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC068831.8-201ENST00000620171 435 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC004777.1-201ENST00000624317 287 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AP000843.1-201ENST00000624880 701 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC025125.1-201ENST00000624743 1922 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 PHKBP1-201ENST00000450951 1951 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 THAP12P5-201ENST00000405864 2275 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC026951.1-201ENST00000559530 2459 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 IL6STP1-201ENST00000346911 1020 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 RNU6-492P-201ENST00000363035 104 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 RNU6-115P-201ENST00000364310 107 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 RNU2-42P-201ENST00000410697 113 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC009518.2-201ENST00000418056 731 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC233981.1-201ENST00000423224 461 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 OR2AH1P-201ENST00000425717 928 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AL513175.1-201ENST00000431492 780 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 MRPL48P1-201ENST00000445390 636 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 RPL23AP15-201ENST00000450202 459 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 NUTF2P7-201ENST00000453086 375 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC002553.2-201ENST00000453217 340 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 RN7SL98P-201ENST00000462271 300 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 RN7SL41P-201ENST00000476144 297 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 UBA52P3-201ENST00000491303 382 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 RPL5P23-201ENST00000496040 868 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC015795.1-201ENST00000513669 327 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC133552.5-201ENST00000604266 540 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC106791.2-201ENST00000604680 391 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC131235.4-201ENST00000609288 620 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC009318.3-201ENST00000616916 503 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 AC116618.1-201ENST00000634617 774 ntBASIC5.11□□□□□ -1.59
COL20A1Q9P218 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL20A1Q9P218 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.11□□□□□ -1.59
COL20A1Q9P218 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL20A1Q9P218 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL20A1Q9P218 OR56B2P-201ENST00000317102 954 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 RNU5D-1-201ENST00000363299 116 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 Y_RNA.311-201ENST00000365068 96 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 RNA5SP151-201ENST00000365632 117 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL20A1Q9P218 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC098592.1-201ENST00000419352 333 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 Z74021.1-201ENST00000423610 407 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 NDUFA5P7-201ENST00000452914 242 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 HMGN3P1-201ENST00000453847 193 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC126121.1-201ENST00000482313 553 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 RN7SL810P-201ENST00000493031 276 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC117522.2-201ENST00000510049 657 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 MTCO1P30-201ENST00000515244 580 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL20A1Q9P218 CYCSP29-201ENST00000533731 318 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 UBE2NP1-201ENST00000545592 458 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC121247.2-201ENST00000604776 136 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.1□□□□□ -1.59
COL20A1Q9P218 AL354760.1-201ENST00000608357 643 ntBASIC5.1□□□□□ -1.59
COL20A1Q9P218 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms