Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL356535.1-201ENST00000440335 398 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 APOOP4-201ENST00000513530 597 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC006504.3-201ENST00000586818 523 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 Z99755.1-201ENST00000414048 380 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AL158071.1-201ENST00000430315 461 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 HMGB1P16-201ENST00000447155 540 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 MRPL35P4-201ENST00000453682 566 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC118465.1-201ENST00000513820 1271 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AL121766.1-201ENST00000547436 487 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AL390334.1-201ENST00000556395 450 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AL360157.1-201ENST00000565962 87 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 AC233309.1-201ENST00000619522 751 ntBASIC4.54□□□□□ -1.68
PHRF1Q9P1Y6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC017007.4-201ENST00000503353 1352 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 RNA5SP80-201ENST00000410475 111 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC093698.1-201ENST00000423843 571 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC000041.1-201ENST00000439655 175 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC023389.2-201ENST00000580031 955 ntBASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHRF1Q9P1Y6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AL024507.1-201ENST00000412741 274 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 COTL1P1-201ENST00000422309 375 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AC006989.1-201ENST00000427212 131 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AC138409.2-202ENST00000507274 458 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AC113192.3-201ENST00000529152 742 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 OR5AP1P-201ENST00000529730 940 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 DUXAP6-201ENST00000553858 601 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 AC103858.2-201ENST00000621471 543 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.52□□□□□ -1.69
PHRF1Q9P1Y6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 RNU6-283P-201ENST00000364788 107 ntBASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 AC069499.1-201ENST00000489433 509 ntBASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PHRF1Q9P1Y6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 RNU6-729P-201ENST00000384399 107 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 HMGN2P8-201ENST00000391458 268 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 HMGN1P24-201ENST00000412282 298 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AL139132.1-201ENST00000431587 344 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC005229.2-201ENST00000456995 399 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 RPL23AP71-201ENST00000470966 469 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC021678.1-201ENST00000505195 936 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms