Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 AL133338.2-201ENST00000604292 736 ntBASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 AL359535.1-201ENST00000612100 1087 ntBASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 RAD17P1-201ENST00000418130 2042 ntBASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
POLR1BQ9H9Y6 AL355578.1-201ENST00000607405 1328 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC107081.3-201ENST00000612715 2034 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNA5SP391-201ENST00000363456 119 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 Y_RNA.472-201ENST00000384322 102 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 SNORA48.7-201ENST00000391302 135 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RPS3AP25-201ENST00000411660 793 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AL450992.3-201ENST00000413192 568 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC008280.1-201ENST00000418851 412 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AL645608.4-201ENST00000423619 154 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 MTCO1P54-201ENST00000430139 712 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AL513175.1-201ENST00000431492 780 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 CBX1P1-201ENST00000440184 427 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RPS26P56-201ENST00000444468 240 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 CDC27P1-201ENST00000445384 715 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AP000893.1-201ENST00000474462 794 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 HMGB1P21-201ENST00000502313 581 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 DYNLL1P6-201ENST00000503440 264 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 MTCO1P35-201ENST00000515270 228 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC069366.1-201ENST00000583159 838 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 BNIP3P33-201ENST00000598912 569 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AC016877.3-201ENST00000606778 504 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 AL133243.1-201ENST00000614487 366 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 MTND4P8-201ENST00000514997 1362 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 ERCC6-202ENST00000374127 1782 ntBASIC4.5□□□□□ -1.69
POLR1BQ9H9Y6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC025031.4-201ENST00000621248 3271 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC016716.1-201ENST00000265882 708 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 RNU4-92P-201ENST00000363783 136 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 MIR217-201ENST00000384817 110 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 SNORA40.2-201ENST00000390847 128 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AL139098.1-201ENST00000407291 389 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AL592310.1-201ENST00000414330 671 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC084290.1-201ENST00000434995 374 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC122718.1-201ENST00000439448 744 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 RPL7P59-201ENST00000447700 943 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 FAM133DP-201ENST00000464802 691 ntBASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
POLR1BQ9H9Y6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms