Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPL23AP61-201ENST00000623642 466 ntBASIC3.99□□□□□ -1.77
NXF3Q9H4D5 OR5AC4P-202ENST00000642086 985 ntBASIC3.99□□□□□ -1.77
NXF3Q9H4D5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NXF3Q9H4D5 MAPK10-253ENST00000641010 4072 ntBASIC3.99□□□□□ -1.77
NXF3Q9H4D5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NXF3Q9H4D5 AC093311.1-201ENST00000506586 2021 ntBASIC3.99□□□□□ -1.77
NXF3Q9H4D5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC007685.1-201ENST00000329806 452 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 MIR7-1-201ENST00000384871 110 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 CRYBB2P1-203ENST00000415709 538 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 FAM204CP-201ENST00000424489 642 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 MTCO3P21-201ENST00000430791 643 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 TRIM60P13-201ENST00000432350 1283 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC073387.1-201ENST00000453261 709 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC098824.1-201ENST00000453565 980 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 EIF2S2P4-201ENST00000461070 984 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC018797.3-201ENST00000513388 1241 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 DUXAP2-201ENST00000519198 589 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AL357559.1-201ENST00000622228 274 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 AL118508.4-201ENST00000624142 1176 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 LINC00561-201ENST00000565815 2738 ntBASIC3.98□□□□□ -1.77
NXF3Q9H4D5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NXF3Q9H4D5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 SNORD46.1-201ENST00000364139 104 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC245054.1-201ENST00000420944 258 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 BTBD7P2-201ENST00000441962 620 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 MTND2P3-201ENST00000452458 470 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 RNU6-1218P-201ENST00000458990 108 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 RPL7P49-201ENST00000471402 708 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 OR52A4P-202ENST00000481634 799 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 SNORA70.18-201ENST00000516696 98 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC104997.1-201ENST00000519761 717 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 OR5B10P-201ENST00000532869 642 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC135001.1-201ENST00000544546 283 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 MIR3944-201ENST00000581277 108 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC020914.6-201ENST00000594327 272 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 PSMA6P4-201ENST00000603247 718 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC010680.3-201ENST00000604215 520 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AL163642.2-201ENST00000604722 1019 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AP003392.5-201ENST00000607857 415 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC019176.2-201ENST00000611579 315 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 AC015967.1-201ENST00000619893 476 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 U6.105-201ENST00000637379 88 ntBASIC3.97□□□□□ -1.77
NXF3Q9H4D5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NXF3Q9H4D5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
NXF3Q9H4D5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NXF3Q9H4D5 AC018555.1-201ENST00000567548 1980 ntBASIC3.96□□□□□ -1.77
NXF3Q9H4D5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 MIR183-201ENST00000384958 110 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC073464.3-201ENST00000422564 712 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 MTCO1P57-201ENST00000432182 261 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 RSL24D1P8-201ENST00000434442 492 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 RN7SL293P-201ENST00000481765 281 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms