Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC090017.1-201ENST00000548612 1779 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC006042.3-201ENST00000454684 1469 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 RNU6-553P-201ENST00000364047 96 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 SNORD116.1-201ENST00000365628 92 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 RNU6-413P-201ENST00000384115 107 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 ATP5F1P3-201ENST00000397213 657 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 COX6CP17-201ENST00000421389 185 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AL593851.1-201ENST00000426171 157 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 HIGD1AP12-201ENST00000427832 281 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 MTCYBP39-201ENST00000437562 491 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 FGF7P5-201ENST00000441829 291 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC007327.1-201ENST00000447461 264 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 TPT1P12-201ENST00000448968 492 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 HSPE1P22-201ENST00000456856 327 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 HIGD1AP18-201ENST00000520730 278 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 ELOCP32-201ENST00000548625 324 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 RN7SL52P-201ENST00000584271 284 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC005191.1-201ENST00000603950 358 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 RN7SKP299-201ENST00000606679 301 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC019193.2-201ENST00000610012 634 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 AC139713.2-214ENST00000642059 1811 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 MAPK10-303ENST00000641324 3959 ntBASIC5.29□□□□□ -1.56
SALL3Q9BXA9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL3Q9BXA9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RNA5SP447-201ENST00000363749 119 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RNU6-157P-201ENST00000383957 107 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 U3.22-201ENST00000391120 215 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RPL26P37-201ENST00000411983 438 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 BTF3P8-201ENST00000414577 526 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 UBE2V1P10-201ENST00000414685 269 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 CNOT7P1-201ENST00000429006 852 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 FHP1-201ENST00000442741 703 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RPL7P22-201ENST00000466005 733 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RN7SL738P-201ENST00000470264 297 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RN7SL812P-201ENST00000493791 279 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC113347.3-201ENST00000509113 148 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 IGKV2D-10-201ENST00000520194 281 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 PHBP17-201ENST00000528576 541 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 TOMM20P2-201ENST00000540082 421 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC006064.5-201ENST00000541782 248 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC012254.4-201ENST00000588843 273 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 VN1R90P-201ENST00000595717 726 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AL031666.3-201ENST00000609320 1006 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 MIR378J-201ENST00000611988 109 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RN7SL722P-201ENST00000617780 284 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 RN7SL565P-201ENST00000618246 284 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC073534.2-201ENST00000620377 381 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC109454.4-201ENST00000623411 649 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms