Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TCEA1P2-201ENST00000420496 906 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 RPS6P14-201ENST00000425165 719 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX3Q99909 HSFY7P-201ENST00000432672 318 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 HSFY8P-201ENST00000437934 318 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 H2AFZP6-201ENST00000444403 394 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX3Q99909 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 HSFY5P-201ENST00000453726 309 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 RPS15AP1-201ENST00000457423 391 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 AC068305.1-201ENST00000497406 726 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC078918.1-201ENST00000498515 228 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC093720.1-201ENST00000505681 714 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC118282.2-201ENST00000508739 374 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC006499.6-201ENST00000511169 607 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX3Q99909 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 MIR2114-201ENST00000516645 80 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 HIGD1AP5-201ENST00000529959 259 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX3Q99909 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX3Q99909 AP004242.1-201ENST00000533701 349 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX3Q99909 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 TOMM20P2-201ENST00000540082 421 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX3Q99909 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX3Q99909 AC087477.6-201ENST00000559595 843 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC009101.1-201ENST00000568135 242 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC234771.5-201ENST00000600161 514 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 COX6CP4-201ENST00000605798 228 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 HSPE1P14-201ENST00000605812 302 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC022306.3-201ENST00000619930 550 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 AC009269.6-201ENST00000621778 588 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX3Q99909 AC010928.1-201ENST00000592477 1447 ntBASIC3.83□□□□□ -1.8
SSX3Q99909 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSX3Q99909 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX3Q99909 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX3Q99909 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX3Q99909 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSX3Q99909 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX3Q99909 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX3Q99909 AL157700.1-201ENST00000561973 1432 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC111188.2-201ENST00000529697 1387 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AL122126.1-201ENST00000546905 1318 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX3Q99909 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX3Q99909 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSX3Q99909 RNU6-298P-201ENST00000390888 96 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 SFR1P1-201ENST00000403720 688 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 RN7SKP267-201ENST00000410381 285 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 MTND4P22-201ENST00000413116 1169 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC069213.2-201ENST00000420238 366 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 AL359265.2-201ENST00000434367 631 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 RPL36AP15-201ENST00000444514 266 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC244505.3-201ENST00000454598 187 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX3Q99909 RPL12P20-201ENST00000475538 479 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC012158.1-204ENST00000483430 465 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX3Q99909 AC005921.1-201ENST00000510589 286 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC008837.1-201ENST00000511513 412 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC090151.1-201ENST00000520784 730 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC010376.1-201ENST00000522101 334 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AC019227.1-201ENST00000526902 510 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX3Q99909 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX3Q99909 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 FKBP1BP1-201ENST00000553366 325 ntBASIC3.82□□□□□ -1.8
SSX3Q99909 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX3Q99909 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX3Q99909 AC093249.4-201ENST00000564755 259 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms