Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC008072.1-201ENST00000434254 824 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 CYCSP11-201ENST00000436426 315 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 RHOT1P3-201ENST00000436571 331 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 ELOCP10-201ENST00000440624 327 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 SNRPGP9-201ENST00000456025 225 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC010350.1-201ENST00000504908 231 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC108043.1-201ENST00000512696 574 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC083923.1-201ENST00000523708 376 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AP003392.2-201ENST00000527269 208 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 MED28P5-201ENST00000528254 438 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC021006.3-201ENST00000530771 192 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 OR4C2P-201ENST00000530855 1064 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC018552.1-201ENST00000562099 811 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 EIF1P6-201ENST00000600054 334 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 ELOCP34-201ENST00000604436 327 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC091965.4-201ENST00000607691 587 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AL627230.1-201ENST00000613077 211 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AL591926.8-201ENST00000616876 211 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC012414.7-202ENST00000622705 1090 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC024023.1-201ENST00000624530 922 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC099654.10-201ENST00000640395 161 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 NEAT1-202ENST00000501122 22743 ntBASIC5.89□□□□□ -1.47
DDX11Q96FC9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX11Q96FC9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.89□□□□□ -1.47
DDX11Q96FC9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DDX11Q96FC9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC016716.1-201ENST00000265882 708 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 RN7SKP113-201ENST00000363891 295 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 RNU4-91P-201ENST00000364778 135 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 Y_RNA.303-201ENST00000364998 94 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 RNA5SP428-201ENST00000365129 132 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DDX11Q96FC9 Y_RNA.390-201ENST00000383932 102 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 SNORA66-201ENST00000384792 133 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 TAF9BP1-201ENST00000396646 746 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 Z97832.1-201ENST00000402490 328 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 UBE2V1P8-201ENST00000437166 265 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 RPL34P20-201ENST00000442771 351 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 HMGB1P16-201ENST00000447155 540 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL592447.1-201ENST00000447592 540 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 ELOCP23-201ENST00000452014 332 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL691482.1-201ENST00000453255 87 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC006463.2-201ENST00000473326 348 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC109471.1-201ENST00000511631 612 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 SMARCE1P4-201ENST00000523647 241 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 TPRKBP2-201ENST00000565969 475 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC011453.2-201ENST00000603737 729 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AL031320.1-201ENST00000604177 357 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC009220.3-201ENST00000604318 586 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 U4.5-201ENST00000617137 123 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 BX005214.3-202ENST00000619809 325 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 AC119674.1-212ENST00000641155 993 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 HSPA8P17-201ENST00000427029 1382 ntBASIC5.88□□□□□ -1.47
DDX11Q96FC9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
DDX11Q96FC9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms