Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AL645608.4-201ENST00000423619 154 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AL513175.1-201ENST00000431492 780 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC009220.1-201ENST00000451614 275 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 HMGN3P1-201ENST00000453847 193 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 RPS29P22-201ENST00000472363 168 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 RPL7P18-201ENST00000478965 734 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SETP14-201ENST00000497538 873 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC010587.2-201ENST00000511727 448 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 MTCO1P30-201ENST00000515244 580 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SDAD1P1-202ENST00000524156 2051 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC063949.1-201ENST00000552900 865 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 HIGD1AP17-201ENST00000554576 276 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 OR4K7P-201ENST00000580232 945 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC068790.4-201ENST00000602474 263 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC233280.2-201ENST00000603917 1070 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC069304.3-201ENST00000603938 1084 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC133552.5-201ENST00000604266 540 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AC005332.6-201ENST00000613178 446 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 AL672167.1-203ENST00000641299 2975 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 NEAT1-202ENST00000501122 22743 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 Y_RNA.169-201ENST00000363745 96 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 RNA5SP332-201ENST00000391063 115 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 RNU6-757P-201ENST00000410334 100 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 RN7SKP100-201ENST00000411258 284 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AL136133.1-201ENST00000413694 376 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CEACAMP8-201ENST00000413902 580 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 MTND2P18-201ENST00000419962 1030 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 MTCYBP34-201ENST00000439552 670 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC011753.3-201ENST00000443436 406 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC006967.1-201ENST00000467608 589 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CCDC75P1-201ENST00000469247 791 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 NDUFA5P9-201ENST00000472609 340 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 GSTP1P1-201ENST00000548078 319 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 RN7SL802P-201ENST00000577858 299 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AL391358.1-201ENST00000605342 190 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 COX6CP4-201ENST00000605798 228 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AC131238.1-201ENST00000617135 328 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 AL442639.1-201ENST00000625030 1899 ntBASIC5.6□□□□□ -1.51
CHMP4CQ96CF2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL451142.2-201ENST00000429076 2090 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 FAM3C2-201ENST00000312214 681 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 RNA5SP443-201ENST00000363083 132 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 RN7SKP224-201ENST00000364140 325 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 SUGT1P1-201ENST00000379514 476 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms