Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NPM1P39-201ENST00000449818 867 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 MTATP6P14-201ENST00000455189 673 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 HMGN1P8-201ENST00000463578 288 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 RPL6P9-201ENST00000466502 859 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 RPL23AP12-201ENST00000467573 473 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC006511.1-201ENST00000470614 315 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC117525.1-201ENST00000515228 503 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 SNORA70.17-201ENST00000516449 133 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 RNU1-103P-201ENST00000516502 125 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 FTH1P11-201ENST00000517577 551 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 GTF2IP8-201ENST00000560687 584 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 MTATP6P24-201ENST00000576835 677 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AC006077.1-201ENST00000604746 343 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL139089.1-201ENST00000620372 975 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNED1Q8TER0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNED1Q8TER0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNED1Q8TER0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 MIR365B-201ENST00000362317 111 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 RNU6-819P-201ENST00000364116 107 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AL589655.1-201ENST00000405398 482 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 MTCO2P1-201ENST00000424648 477 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 SETP8-201ENST00000435341 628 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AL591363.1-201ENST00000450091 483 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 CYCSP35-201ENST00000451978 304 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 EIF2S2P4-201ENST00000461070 984 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC021146.5-201ENST00000503544 545 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC096571.1-202ENST00000506634 735 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 SNORA70.18-201ENST00000516696 98 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 OR4A12P-201ENST00000530847 918 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 UBTFL9-201ENST00000534504 1148 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC087888.1-201ENST00000550884 1254 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC012493.2-201ENST00000595083 291 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 AL138955.1-201ENST00000622881 1040 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 MFSD8-236ENST00000641509 4050 ntBASIC4.56□□□□□ -1.68
SNED1Q8TER0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNED1Q8TER0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.56□□□□□ -1.68
SNED1Q8TER0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 SNORA48.2-201ENST00000390926 124 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL353692.2-201ENST00000407054 335 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 RNA5SP120-201ENST00000410900 112 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 USP12PY-201ENST00000427677 1064 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC017083.1-201ENST00000428093 483 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 MTCO1P57-201ENST00000432182 261 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 CETN4P-201ENST00000432407 469 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 MTND1P31-201ENST00000449206 961 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC027338.1-201ENST00000514840 825 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 RNU6-319P-201ENST00000516025 108 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 OR7E13P-201ENST00000526052 910 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC005776.1-201ENST00000603164 290 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC025811.1-201ENST00000604312 472 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC012603.1-201ENST00000606424 528 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL592494.3-201ENST00000609485 464 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 MIR8058-201ENST00000615737 89 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC068787.1-201ENST00000623908 691 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL356118.1-201ENST00000635272 1078 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms