Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 NENFP3-201ENST00000503735 313 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 ARL2BPP6-201ENST00000512757 439 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 RNA5SP438-201ENST00000516561 112 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 RN7SKP96-201ENST00000516948 297 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AP000648.1-201ENST00000529682 397 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC068993.1-201ENST00000546724 589 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC079905.1-201ENST00000549280 475 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC137800.2-201ENST00000574375 120 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AP000769.2-201ENST00000602344 396 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC136475.10-201ENST00000620253 385 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC073869.8-201ENST00000641806 335 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 AC000374.1-201ENST00000434698 1745 ntBASIC5.2□□□□□ -1.58
HIPK4Q8NE63 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
HIPK4Q8NE63 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL672167.1-204ENST00000641875 3017 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LINC01355-201ENST00000566551 5444 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 OR11H4-201ENST00000315409 1082 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 RNA5SP273-201ENST00000362484 113 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 RNU1-150P-201ENST00000362491 162 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 RNU6-769P-201ENST00000384407 104 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 USP9YP6-201ENST00000413550 854 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 C1DP2-201ENST00000418167 426 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 RPL24P2-201ENST00000421023 475 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL445669.1-201ENST00000426743 755 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 CLUHP1-201ENST00000435012 1190 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 OR7E125P-201ENST00000443450 846 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 PSPHP1-201ENST00000450062 261 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 USP9YP34-201ENST00000453983 808 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 OR6K1P-201ENST00000456766 971 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 BTF3P5-201ENST00000457252 467 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL672167.3-201ENST00000465951 960 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 ACTR3P3-201ENST00000480448 893 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 FCF1P3-201ENST00000496394 590 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 TMEM251P1-201ENST00000503717 318 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC108078.1-201ENST00000508073 725 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 Y_RNA.667-201ENST00000516212 107 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 snoU109.6-201ENST00000516831 118 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AP006245.2-201ENST00000522004 300 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 CYCSP28-201ENST00000534284 321 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC127381.1-201ENST00000555979 939 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC091135.1-201ENST00000585943 307 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC022916.3-201ENST00000592961 742 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LARP7P1-201ENST00000605576 316 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC078899.5-201ENST00000612475 178 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 MIR3688-2-201ENST00000636963 87 ntBASIC5.19□□□□□ -1.58
HIPK4Q8NE63 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIPK4Q8NE63 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HIPK4Q8NE63 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.18□□□□□ -1.58
HIPK4Q8NE63 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms