Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC112198.2-201ENST00000426589 6996 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 CDC27P2-201ENST00000425026 1922 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RNA5SP388-201ENST00000362584 119 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 SNORD65.1-201ENST00000390889 71 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MTND4LP20-201ENST00000402379 270 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RNU2-66P-201ENST00000410650 161 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RPEP3-201ENST00000425462 676 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RPL19P16-201ENST00000433839 588 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 USP9YP35-201ENST00000435696 412 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MTND1P30-201ENST00000441241 901 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 ARL5AP2-201ENST00000444698 533 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC090804.1-201ENST00000448870 490 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AL591363.1-201ENST00000450091 483 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RFC5P1-201ENST00000454419 874 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RPL7AP28-201ENST00000464513 571 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC126182.1-201ENST00000478134 357 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC104685.1-201ENST00000502445 371 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC093824.1-201ENST00000508796 343 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 FABP5P5-201ENST00000515537 406 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MIR3160-1-201ENST00000577972 85 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC013476.2-201ENST00000614456 459 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AL136981.2-201ENST00000617319 734 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AC005609.4-201ENST00000625071 447 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 AL592148.3-201ENST00000608771 2646 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MTCO1P6-201ENST00000481192 1384 ntBASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC44A3Q8N4M1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC093849.1-201ENST00000563631 2209 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RNA5SP515-201ENST00000364570 118 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RNU5E-4P-201ENST00000364931 120 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 MIR23A-201ENST00000385245 73 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RNA5SP397-201ENST00000391323 118 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL357515.1-201ENST00000402967 542 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC002524.1-201ENST00000411687 547 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 OR8G2P-201ENST00000412796 908 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 MTCYBP38-201ENST00000417160 1123 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC010975.2-201ENST00000427781 588 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 CYCSP11-201ENST00000436426 315 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 USP9YP22-201ENST00000438971 294 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL353093.1-201ENST00000441292 436 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 ST13P20-201ENST00000447996 1065 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC093392.2-201ENST00000450682 337 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms