Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC008957.3-201ENST00000624112 2242 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNA5SP273-201ENST00000362484 113 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.100-201ENST00000363141 102 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNU6-1297P-201ENST00000384415 104 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNU6-505P-201ENST00000384427 107 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNU6-193P-201ENST00000410977 107 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNU4-61P-201ENST00000411243 107 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC113618.1-201ENST00000416747 285 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RPS15AP30-201ENST00000420976 390 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 BEND7P1-201ENST00000422058 457 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AL353662.1-201ENST00000439099 327 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC027575.1-201ENST00000481064 460 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AK3P4-201ENST00000504283 583 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AP003497.1-201ENST00000528472 562 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RNU6-89P-201ENST00000606519 100 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AL352984.2-201ENST00000611153 546 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RN7SL787P-201ENST00000613000 284 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AL445647.2-201ENST00000615170 130 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 AC040168.1-201ENST00000623594 991 ntBASIC6.69□□□□□ -1.34
RNF135Q8IUD6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF135Q8IUD6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RNA5SP110-201ENST00000362638 115 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RNU4-48P-201ENST00000365559 182 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.452-201ENST00000384202 108 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 MIR514A2-201ENST00000385131 88 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 MIR514A3-201ENST00000385132 88 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AL024474.1-201ENST00000404655 591 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RNU4-26P-201ENST00000410270 107 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RN7SKP279-201ENST00000411383 298 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC245054.2-201ENST00000415639 319 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC092832.1-201ENST00000422934 400 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC096632.1-201ENST00000427395 310 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RPL36P19-201ENST00000430744 301 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AL138799.3-201ENST00000438968 350 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 CEACAMP9-201ENST00000442990 513 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 HMGB1P15-201ENST00000453854 435 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 UBFD1P1-201ENST00000473259 814 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RPL21P6-201ENST00000479171 504 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC023818.1-201ENST00000498379 384 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 OR4D12P-201ENST00000509361 911 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 TTC39CP1-201ENST00000512513 755 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 RNU6-559P-201ENST00000516151 98 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.667-201ENST00000516212 107 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 IGLV2-28-201ENST00000520681 304 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC112191.2-201ENST00000522428 333 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 MRPL57P1-201ENST00000621486 265 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AC079597.1-201ENST00000624306 508 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AL133216.2-202ENST00000634512 349 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms