Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC011978.2-201ENST00000569835 2054 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AL627171.1-201ENST00000618845 1308 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC105074.1-201ENST00000623380 3095 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 RNU1-85P-201ENST00000364127 164 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 MIR620-201ENST00000385232 95 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC073264.1-201ENST00000411508 416 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC069218.2-201ENST00000411665 344 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 SNRPFP1-201ENST00000414761 252 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 SFR1P2-201ENST00000421841 730 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 PPIAP17-201ENST00000438507 471 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC069285.2-201ENST00000440210 275 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 DDX39BP2-208ENST00000453923 258 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC244505.3-201ENST00000454598 187 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 RPS27AP17-201ENST00000463344 455 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 GAPDHP36-201ENST00000480688 918 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 MIR3138-201ENST00000585238 82 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 IPO5P1-202ENST00000600039 287 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 YWHAQP7-201ENST00000603536 658 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 HSPE1P14-201ENST00000605812 302 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 Z98200.1-201ENST00000607298 470 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AL133445.2-201ENST00000611191 527 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC023043.4-201ENST00000612081 449 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC114781.5-201ENST00000615297 108 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 LINC00901.1-201ENST00000617252 152 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC007546.2-201ENST00000623996 360 ntBASIC4.5□□□□□ -1.69
PRPF39Q86UA1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PRPF39Q86UA1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RNU6-236P-201ENST00000363886 106 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RNU6-356P-201ENST00000384140 107 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC233981.1-201ENST00000423224 461 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 VDAC1P6-201ENST00000430062 855 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 Z99714.1-201ENST00000450463 807 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 PPIAP3-201ENST00000450588 505 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RN7SL98P-201ENST00000462271 300 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 S100A11P1-201ENST00000477525 312 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC048346.1-201ENST00000510247 144 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RNA5SP497-201ENST00000516081 97 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 OR8G5-201ENST00000524943 1041 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 YWHAZP1-201ENST00000556286 722 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 PSMB7P1-201ENST00000556349 514 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC044913.1-201ENST00000557200 430 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AL020997.2-201ENST00000602607 184 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC097504.2-201ENST00000608088 454 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC093673.2-201ENST00000609674 331 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 VN1R7P-201ENST00000619242 903 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC124312.6-202ENST00000623624 418 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 CASC19-261ENST00000641853 1638 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 AC087190.4-201ENST00000574616 8334 ntBASIC4.49□□□□□ -1.69
PRPF39Q86UA1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF39Q86UA1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms