Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4DQ86TL0 CASC19-260ENST00000641828 2001 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC008627.1-201ENST00000517511 1704 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNU6-379P-201ENST00000363813 104 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 Y_RNA.557-201ENST00000384680 107 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 U3.23-201ENST00000391132 200 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL121972.1-201ENST00000402023 252 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL136116.1-201ENST00000403591 381 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 NPM1P38-201ENST00000403835 865 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNU6-985P-201ENST00000410182 104 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RPL35AP3-201ENST00000414680 288 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 MTATP6P29-201ENST00000415057 132 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RPL12P16-201ENST00000431098 498 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 PRPF38AP2-201ENST00000438179 851 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RPS7P3-201ENST00000443360 580 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL137792.2-201ENST00000443484 235 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL445466.1-201ENST00000448432 357 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 TRGVB-201ENST00000453257 471 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC009963.3-201ENST00000458090 486 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNU7-152P-201ENST00000458982 64 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC097493.1-201ENST00000463958 372 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC012181.1-201ENST00000479895 423 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC068587.1-201ENST00000483613 781 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNU6-388P-201ENST00000517012 105 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RNU6-389P-201ENST00000517048 105 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC023442.1-201ENST00000531247 422 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 NPM1P42-201ENST00000560329 862 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC092332.1-201ENST00000563684 829 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC008507.3-201ENST00000585753 472 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC073539.2-201ENST00000597113 165 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AC022418.1-201ENST00000624118 445 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 Z69720.2-201ENST00000624755 279 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 ZNF519P1-201ENST00000449011 1626 ntBASIC5.41□□□□□ -1.54
ATG4DQ86TL0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
ATG4DQ86TL0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC090220.1-201ENST00000593078 1699 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 ERCC6-202ENST00000374127 1782 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC090337.1-201ENST00000579651 2074 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 Y_RNA.148-201ENST00000363557 117 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RNU6-289P-201ENST00000364093 107 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPL23AP32-201ENST00000395315 459 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms