Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 YWHAZP1-201ENST00000556286 722 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC044913.1-201ENST00000557200 430 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC069061.3-201ENST00000582254 823 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC008759.1-201ENST00000589783 983 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 YWHAQP7-201ENST00000603536 658 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AL513477.2-201ENST00000607858 568 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AP000238.1-201ENST00000608759 426 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 AC087821.2-201ENST00000637086 450 ntBASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NHLRC1Q6VVB1 OR11H5P-202ENST00000641612 1325 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RNA5SP22-201ENST00000365393 109 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RNU6-398P-201ENST00000384143 109 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RNU1-44P-201ENST00000384453 163 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 MIR649-201ENST00000384843 97 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 Y_RNA.578-201ENST00000390903 88 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AL121972.1-201ENST00000402023 252 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RPS16P5-201ENST00000406501 404 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 UBTFL3-201ENST00000418934 1024 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC092634.2-201ENST00000428146 1010 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 SKP1P3-201ENST00000429280 487 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC092393.1-201ENST00000439625 742 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC104306.1-201ENST00000449702 371 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 NPM1P13-201ENST00000452663 865 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC244505.3-201ENST00000454598 187 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 DHFRP3-201ENST00000455595 559 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RN7SL354P-201ENST00000469282 294 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC006463.2-201ENST00000473326 348 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC010301.1-201ENST00000473936 355 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 UBTFL6-201ENST00000477929 1024 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC007686.1-201ENST00000488511 463 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 SUMO2P5-201ENST00000506790 245 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 IGLVIV-53-201ENST00000520107 367 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 OR4A45P-201ENST00000529954 901 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AP001317.1-201ENST00000531194 960 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC137768.1-201ENST00000549998 553 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC087897.1-201ENST00000550134 156 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 MTCYBP27-201ENST00000555160 670 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC020634.1-201ENST00000608701 549 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC012409.3-201ENST00000611343 981 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 C2orf27A-204ENST00000623058 969 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC007546.2-201ENST00000623996 360 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 AC006065.6-201ENST00000625201 545 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.95□□□□□ -1.78
NHLRC1Q6VVB1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms