Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC087312.1-201ENST00000471411 480 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC006557.5-201ENST00000603126 811 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AL645568.2-201ENST00000432815 1337 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AL451142.2-201ENST00000429076 2090 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 Y_RNA.466-201ENST00000384294 113 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 MIR887-201ENST00000401258 79 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 VN1R90P-201ENST00000595717 726 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 RNU1-15P-201ENST00000353977 144 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 SEPT7P2-202ENST00000398921 823 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 BX119904.3-201ENST00000428194 957 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC073069.1-201ENST00000428657 441 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AL035404.1-201ENST00000497982 568 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC064859.1-201ENST00000624741 174 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.28□□□□□ -1.88
RIF1Q5UIP0 MIR195-201ENST00000385194 87 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 U3.39-201ENST00000408569 239 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AL591473.1-201ENST00000464297 313 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 RN7SL585P-201ENST00000470538 280 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC008565.1-201ENST00000509046 885 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC114781.4-201ENST00000513707 639 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AC009812.2-201ENST00000517657 457 ntBASIC3.28□□□□□ -1.88
RIF1Q5UIP0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.28□□□□□ -1.89
RIF1Q5UIP0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC117434.1-201ENST00000419971 836 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AL513174.1-201ENST00000423182 629 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC011742.1-201ENST00000431448 434 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 SETP12-201ENST00000514068 805 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC092868.3-201ENST00000560515 784 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 CYCSP41-201ENST00000616920 296 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 CR383658.2-201ENST00000547576 1525 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC007899.1-201ENST00000412776 775 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 DBIP2-201ENST00000419076 262 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms