Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 MTND5P27-201ENST00000428871 1720 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC093297.3-201ENST00000607056 2517 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 OR4G1P-203ENST00000641984 1631 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AL021877.2-201ENST00000624442 10684 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.25-201ENST00000362528 102 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.187-201ENST00000363918 113 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RNA5SP30-201ENST00000365552 115 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RBMY2KP-201ENST00000418221 992 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC006335.2-201ENST00000437993 330 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 MTCO3P10-201ENST00000455912 772 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 VN1R17P-201ENST00000472048 1090 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC017015.1-201ENST00000477387 286 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC012181.1-201ENST00000479895 423 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RPL38P3-201ENST00000484463 213 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RN7SL808P-201ENST00000496066 299 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC025674.1-201ENST00000507074 324 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RNU6-885P-201ENST00000516607 104 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 SNORA48.10-201ENST00000516965 160 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RNU6-388P-201ENST00000517012 105 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 RNU6-389P-201ENST00000517048 105 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 CDH12P4-201ENST00000517835 295 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 CDH12P3-201ENST00000517935 295 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 CDH12P1-201ENST00000518435 295 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC022861.1-201ENST00000522981 663 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AL022345.1-201ENST00000607292 135 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AL121612.2-201ENST00000612261 482 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 AC009318.4-201ENST00000620496 486 ntBASIC7.32□□□□□ -1.24
RC3H1Q5TC82 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RC3H1Q5TC82 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC012618.3-205ENST00000637896 1496 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.176-201ENST00000363815 109 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 RNU4-2-201ENST00000365668 141 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 SNORD3H-201ENST00000384486 214 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.557-201ENST00000384680 107 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 U3.23-201ENST00000391132 200 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL158073.1-201ENST00000426848 1104 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC023347.2-201ENST00000433994 462 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL451136.1-201ENST00000435399 325 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 RPL12P3-201ENST00000440080 396 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL162739.1-201ENST00000450606 307 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 MEMO1P3-201ENST00000459811 302 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 RN7SL165P-201ENST00000477476 291 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC013356.1-201ENST00000489027 564 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 BTG4P1-201ENST00000510421 183 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 MIR2117-201ENST00000516780 80 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 BCRP9-201ENST00000605312 388 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms