Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RNU6-491P-201ENST00000516099 110 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC083899.3-201ENST00000603413 594 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AL121772.2-201ENST00000614331 297 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.8
PTPN20Q4JDL3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTPN20Q4JDL3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 MIR7-1-201ENST00000384871 110 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 RN7SKP159-201ENST00000410657 292 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL512504.1-201ENST00000415494 778 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC114814.2-201ENST00000419195 485 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 SDCBPP2-201ENST00000424643 885 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC007563.3-201ENST00000433233 371 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 MTCO3P20-201ENST00000454926 688 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 OR5AP1P-201ENST00000529730 940 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 GTF2IP22-201ENST00000554443 182 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC067852.4-201ENST00000590314 478 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AC022387.2-201ENST00000604050 448 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL732618.1-201ENST00000623251 301 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL118496.1-201ENST00000440201 1812 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL133412.1-201ENST00000380194 2992 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 AL136964.1-201ENST00000622038 2990 ntBASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PTPN20Q4JDL3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC007823.1-201ENST00000569932 1566 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC100871.1-201ENST00000507871 1456 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 RNA5SP42-201ENST00000364278 115 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 RNU6-152P-201ENST00000384037 107 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL590704.1-201ENST00000402856 794 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 RPL7P4-203ENST00000430239 730 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL606490.8-201ENST00000441624 319 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 RPL21P133-201ENST00000443666 476 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC104629.2-201ENST00000468627 598 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 MTND4LP31-201ENST00000514859 294 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms