Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 AL645937.3-201ENST00000453647 936 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC013267.1-201ENST00000458227 267 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 KLF3P2-201ENST00000465138 268 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 RN7SL51P-201ENST00000468230 285 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 RPS18P6-201ENST00000476880 458 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 RPSAP50-201ENST00000481955 852 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC091951.2-201ENST00000500762 203 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.47□□□□□ -1.69
SRSF4Q08170 RN7SKP46-201ENST00000515942 234 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 RNU6-1004P-201ENST00000516584 111 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC105031.1-201ENST00000518550 476 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC008802.1-201ENST00000519121 791 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 IGJP1-201ENST00000522682 475 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.47□□□□□ -1.69
SRSF4Q08170 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC025260.1-201ENST00000548858 430 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC005730.3-201ENST00000583067 366 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC133552.5-201ENST00000604266 540 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC018695.5-201ENST00000605872 315 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC104458.1-201ENST00000608243 463 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SRSF4Q08170 AC091834.1-201ENST00000614543 472 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC063943.3-201ENST00000615562 356 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 AC132068.1-201ENST00000623805 459 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 MTCO1P6-201ENST00000481192 1384 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 CASC19-221ENST00000641309 1382 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.47□□□□□ -1.69
SRSF4Q08170 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SRSF4Q08170 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.47□□□□□ -1.69
SRSF4Q08170 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SRSF4Q08170 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRSF4Q08170 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
SRSF4Q08170 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.46□□□□□ -1.69
SRSF4Q08170 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SRSF4Q08170 MTCO1P23-201ENST00000415223 1526 ntBASIC4.46□□□□□ -1.69
SRSF4Q08170 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.46□□□□□ -1.69
SRSF4Q08170 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRSF4Q08170 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SRSF4Q08170 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRSF4Q08170 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRSF4Q08170 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRSF4Q08170 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.46□□□□□ -1.7
SRSF4Q08170 XGY1-201ENST00000381172 446 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SRSF4Q08170 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.46□□□□□ -1.7
SRSF4Q08170 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC093084.1-201ENST00000424233 687 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AL512649.1-201ENST00000428997 581 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 BTF3P10-201ENST00000433415 495 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 MTND3P10-201ENST00000450967 341 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 RPL23AP35-201ENST00000451906 501 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 MTCO3P11-201ENST00000455103 774 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
SRSF4Q08170 RN7SL583P-201ENST00000475692 287 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 RPL7P39-201ENST00000481157 744 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 VPS26AP1-201ENST00000483197 979 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AC008628.2-201ENST00000502605 298 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC104108.1-201ENST00000509930 412 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 OR5AK1P-201ENST00000524837 922 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 HIGD1AP5-201ENST00000529959 259 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.46□□□□□ -1.7
SRSF4Q08170 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AP001804.2-201ENST00000533932 910 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 OR8L1P-201ENST00000534005 955 ntBASIC4.46□□□□□ -1.7
SRSF4Q08170 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.46□□□□□ -1.7
SRSF4Q08170 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.46□□□□□ -1.7
SRSF4Q08170 HMGN2P6-201ENST00000551091 273 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms