Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AP003117.1-201ENST00000602771 554 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 AL592295.2-201ENST00000612578 206 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AC243654.2-201ENST00000612843 443 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 OR6C71P-202ENST00000641886 1107 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 AL732372.2-225ENST00000642124 456 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 ASNSP1-204ENST00000641977 1664 ntBASIC3.22□□□□□ -1.89
HIST1H3AP68431 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H3AP68431 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H3AP68431 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H3AP68431 SEPT7P7-201ENST00000420492 1301 ntBASIC3.21□□□□□ -1.89
HIST1H3AP68431 AC006504.1-201ENST00000562493 3666 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 USP8P1-201ENST00000494673 3183 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 RNA5SP42-201ENST00000364278 115 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 SNORD6-201ENST00000365444 73 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC136624.1-201ENST00000400791 413 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 SDCBPP2-201ENST00000424643 885 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC006989.1-201ENST00000427212 131 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 HMGB3P30-201ENST00000457863 606 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 RN7SL132P-201ENST00000478131 296 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 NPM1P17-201ENST00000479221 602 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC026402.1-201ENST00000513642 170 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 RNU4-18P-201ENST00000516751 149 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 PDCL2P2-201ENST00000533651 189 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 HSPE1P5-201ENST00000561489 272 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC027281.1-201ENST00000574178 758 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC007687.1-201ENST00000602704 304 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AP003117.2-201ENST00000606010 545 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC090912.3-201ENST00000609775 533 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL133370.2-201ENST00000619934 439 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AL732618.1-201ENST00000623251 301 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC068724.3-201ENST00000625906 87 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
HIST1H3AP68431 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H3AP68431 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 OR4A15-201ENST00000314706 1035 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RNA5SP515-201ENST00000364570 118 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RNU6-328P-201ENST00000390887 106 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RPL7P60-201ENST00000397636 735 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RN7SKP156-201ENST00000410308 342 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC245054.1-201ENST00000420944 258 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC002075.2-201ENST00000425207 252 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 OSTCP5-201ENST00000425293 453 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 CFTRP1-201ENST00000456646 183 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC004801.2-202ENST00000463559 283 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 MTCO1P30-201ENST00000515244 580 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RNU2-58P-201ENST00000516403 183 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC007991.1-201ENST00000522680 631 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 TRAV15-201ENST00000556680 249 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 MIR5685-201ENST00000579080 79 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AL451086.1-201ENST00000605596 223 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AL355816.1-201ENST00000607951 118 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC006946.3-201ENST00000609791 756 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC012531.5-201ENST00000611375 151 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms