Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.19□□□□□ -1.9
UBA52P62987 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.19□□□□□ -1.9
UBA52P62987 KLKP1-201ENST00000595979 403 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC012468.1-201ENST00000604888 430 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC011816.2-201ENST00000607089 556 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC103710.3-201ENST00000608157 948 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 AL445437.1-201ENST00000623157 3087 ntBASIC3.18□□□□□ -1.9
UBA52P62987 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UBA52P62987 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 MIR483-201ENST00000385070 76 ntBASIC3.18□□□□□ -1.9
UBA52P62987 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UBA52P62987 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.18□□□□□ -1.9
UBA52P62987 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
UBA52P62987 Z97055.1-201ENST00000419730 712 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AL158071.1-201ENST00000430315 461 ntBASIC3.18□□□□□ -1.9
UBA52P62987 RPS3AP12-201ENST00000443616 753 ntBASIC3.18□□□□□ -1.9
UBA52P62987 RNU7-157P-201ENST00000459600 66 ntBASIC3.18□□□□□ -1.9
UBA52P62987 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AC022336.1-201ENST00000475510 337 ntBASIC3.18□□□□□ -1.9
UBA52P62987 RPS3AP6-201ENST00000484430 795 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AC110768.1-201ENST00000509222 400 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
UBA52P62987 AC008802.1-201ENST00000519121 791 ntBASIC3.18□□□□□ -1.9
UBA52P62987 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.18□□□□□ -1.9
UBA52P62987 RN7SL339P-201ENST00000580597 296 ntBASIC3.18□□□□□ -1.9
UBA52P62987 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.18□□□□□ -1.9
UBA52P62987 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.18□□□□□ -1.9
UBA52P62987 AC091167.4-201ENST00000605079 184 ntBASIC3.18□□□□□ -1.9
UBA52P62987 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 ZNF826P-207ENST00000622273 1910 ntBASIC3.18□□□□□ -1.9
UBA52P62987 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBA52P62987 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
UBA52P62987 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
UBA52P62987 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.18□□□□□ -1.9
UBA52P62987 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.17□□□□□ -1.9
UBA52P62987 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBA52P62987 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBA52P62987 RNU1-75P-201ENST00000347264 129 ntBASIC3.17□□□□□ -1.9
UBA52P62987 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
UBA52P62987 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBA52P62987 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
UBA52P62987 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
UBA52P62987 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
UBA52P62987 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
UBA52P62987 SNORA3.3-201ENST00000408712 125 ntBASIC3.17□□□□□ -1.9
UBA52P62987 MTND2P15-201ENST00000418575 892 ntBASIC3.17□□□□□ -1.9
UBA52P62987 KRR1P1-201ENST00000419430 803 ntBASIC3.17□□□□□ -1.9
UBA52P62987 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.17□□□□□ -1.9
UBA52P62987 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.17□□□□□ -1.9
UBA52P62987 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.17□□□□□ -1.9
UBA52P62987 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.17□□□□□ -1.9
UBA52P62987 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
UBA52P62987 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.17□□□□□ -1.9
UBA52P62987 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 RNU6-352P-201ENST00000516908 107 ntBASIC3.17□□□□□ -1.9
UBA52P62987 RN7SKP289-201ENST00000517244 295 ntBASIC3.17□□□□□ -1.9
UBA52P62987 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.17□□□□□ -1.9
UBA52P62987 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.17□□□□□ -1.9
UBA52P62987 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.17□□□□□ -1.9
UBA52P62987 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.17□□□□□ -1.9
UBA52P62987 AC087499.8-201ENST00000578406 226 ntBASIC3.17□□□□□ -1.9
UBA52P62987 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBA52P62987 BNIP3P19-201ENST00000605397 577 ntBASIC3.17□□□□□ -1.9
UBA52P62987 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 AC091953.5-201ENST00000622919 233 ntBASIC3.17□□□□□ -1.9
UBA52P62987 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.17□□□□□ -1.9
UBA52P62987 AC009452.1-201ENST00000640823 606 ntBASIC3.17□□□□□ -1.9
UBA52P62987 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.17□□□□□ -1.9
UBA52P62987 AL136964.1-201ENST00000622038 2990 ntBASIC3.17□□□□□ -1.9
UBA52P62987 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
UBA52P62987 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBA52P62987 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UBA52P62987 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AP002001.2-201ENST00000529025 1469 ntBASIC3.16□□□□□ -1.9
UBA52P62987 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBA52P62987 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.16□□□□□ -1.9
UBA52P62987 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
UBA52P62987 HMGB3P19-201ENST00000403971 560 ntBASIC3.16□□□□□ -1.9
UBA52P62987 ZNF602P-201ENST00000405929 924 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC069218.2-201ENST00000411665 344 ntBASIC3.16□□□□□ -1.9
UBA52P62987 PTP4A1P5-201ENST00000420305 455 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms