Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A1P61619 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A1P61619 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SEC61A1P61619 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SEC61A1P61619 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A1P61619 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A1P61619 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A1P61619 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC119744.1-201ENST00000454746 1715 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC025263.3-201ENST00000622965 1396 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SEC61A1P61619 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 OR14L1P-202ENST00000641545 3009 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL391994.1-201ENST00000254724 282 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 RNU1-108P-201ENST00000362556 161 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 FABP12P1-201ENST00000401911 322 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 LAP3P1-201ENST00000403648 294 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL355379.1-201ENST00000405542 640 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 RNU6-920P-201ENST00000410926 92 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 Y_RNA.619-201ENST00000410951 90 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL139128.1-201ENST00000413921 941 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 COX6B1P1-201ENST00000415962 213 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 NPM1P11-201ENST00000417106 855 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AF186996.5-201ENST00000418098 904 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL022400.1-201ENST00000423946 935 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 MTCO1P54-201ENST00000430139 712 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 USP9YP31-201ENST00000431405 881 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC092162.1-201ENST00000432828 434 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL772161.1-201ENST00000439130 476 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 RPS29P9-201ENST00000440360 171 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL354714.3-201ENST00000447284 493 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 RPL12P26-201ENST00000452430 487 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL691482.1-201ENST00000453255 87 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL354710.1-201ENST00000453641 246 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 RN7SL41P-201ENST00000476144 297 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 RPS6P4-201ENST00000494693 758 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC147055.4-201ENST00000504399 745 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC113430.1-201ENST00000506872 718 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC079395.1-201ENST00000510981 262 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC105185.1-201ENST00000518705 535 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 NDUFA5P2-201ENST00000519723 344 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC021006.3-201ENST00000530771 192 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC008033.2-201ENST00000542626 177 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 NMNAT1P1-201ENST00000554095 876 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL391156.1-201ENST00000554965 554 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 MIR4480-201ENST00000582492 71 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL031985.2-201ENST00000600955 480 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC004987.4-201ENST00000603383 338 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC006270.3-201ENST00000605967 1036 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AC004492.1-201ENST00000607036 742 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC092653.1-201ENST00000608509 531 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AP000254.1-201ENST00000609934 520 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC023158.2-201ENST00000614876 543 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AL158063.1-201ENST00000615349 536 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 AC018926.3-201ENST00000618841 406 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.18□□□□□ -1.74
SEC61A1P61619 AL049536.1-201ENST00000625043 744 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A1P61619 TLK1P1-201ENST00000456760 2440 ntBASIC4.18□□□□□ -1.74
SEC61A1P61619 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A1P61619 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SEC61A1P61619 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SEC61A1P61619 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms