Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.7□□□□□ -1.66
SUMO3P55854 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SUMO3P55854 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 Z95327.2-201ENST00000414579 1873 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 MTND4P4-201ENST00000439033 1366 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC092376.2-201ENST00000622621 4116 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 AL590763.1-201ENST00000398297 1545 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 RNA5SP187-201ENST00000384400 119 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SUMO3P55854 RN7SKP126-201ENST00000411143 300 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 RPS27AP14-201ENST00000422868 454 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 CENPIP1-201ENST00000425713 902 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 COX6CP13-201ENST00000428703 226 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 PRELID3BP10-201ENST00000431957 584 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 MTND6P18-201ENST00000439477 513 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.69□□□□□ -1.66
SUMO3P55854 MTCO1P19-201ENST00000443487 500 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 CYCSP24-201ENST00000445119 316 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 PAXBP1P1-201ENST00000449315 447 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 OR52J1P-201ENST00000450596 932 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 PLGLA-201ENST00000465668 449 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC022034.3-201ENST00000471393 478 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 UBA52P7-201ENST00000486088 380 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 SNRPCP2-201ENST00000504370 475 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC004069.2-201ENST00000505438 1114 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 HIGD1AP14-201ENST00000507617 282 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 RN7SKP260-201ENST00000516907 149 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 PTP4A1P6-201ENST00000531034 478 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AP004247.1-201ENST00000531556 1289 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC006362.1-201ENST00000567392 174 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC008759.1-201ENST00000589783 983 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AP000403.1-201ENST00000603349 851 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC005084.1-201ENST00000605160 304 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AL121873.1-201ENST00000616013 524 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.69□□□□□ -1.66
SUMO3P55854 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AC099494.2-201ENST00000623371 978 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AP002505.2-201ENST00000623585 696 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 AC092656.1-203ENST00000624134 423 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
SUMO3P55854 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 AL022578.1-201ENST00000439330 1433 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 AC005005.4-201ENST00000623789 16698 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 AL031595.2-201ENST00000624215 19071 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SUMO3P55854 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.69□□□□□ -1.66
SUMO3P55854 AL672167.1-205ENST00000641112 3080 ntBASIC4.69□□□□□ -1.66
SUMO3P55854 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms