Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.58□□□□□ -1.68
NR1H2P55055 RN7SKP147-201ENST00000517154 244 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 DEFB109D-201ENST00000529497 240 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 AC092470.1-201ENST00000546187 132 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 DYNLL1P4-201ENST00000549314 266 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 EDDM3DP-201ENST00000554692 434 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.58□□□□□ -1.68
NR1H2P55055 MIR3934-201ENST00000579806 107 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 AL355812.1-201ENST00000603215 216 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 AC104687.2-201ENST00000604442 342 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 AL159169.3-201ENST00000608871 561 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 AC120349.3-201ENST00000624377 529 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.58□□□□□ -1.68
NR1H2P55055 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NR1H2P55055 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 THAP12P4-201ENST00000528321 2266 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC092747.4-201ENST00000620519 1861 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 CDR1-202ENST00000625883 1485 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NR1H2P55055 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 U3.15-201ENST00000365398 212 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 SNORD116.1-201ENST00000365628 92 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 Y_RNA.465-201ENST00000384293 102 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 MTND4P13-201ENST00000402078 1023 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.57□□□□□ -1.68
NR1H2P55055 RNU2-28P-201ENST00000410457 189 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 RPL26P29-201ENST00000415623 438 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AL807761.1-201ENST00000417622 171 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 RPL21P43-201ENST00000425440 472 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AL049745.1-201ENST00000433953 286 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 MTCYBP31-201ENST00000438855 1122 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC011753.3-201ENST00000443436 406 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC104634.1-201ENST00000452720 462 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.57□□□□□ -1.68
NR1H2P55055 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AC006463.2-201ENST00000473326 348 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC007686.1-201ENST00000488511 463 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.57□□□□□ -1.68
NR1H2P55055 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 IGLVIV-53-201ENST00000520107 367 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.57□□□□□ -1.68
NR1H2P55055 OR6C73P-201ENST00000546432 358 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AL121834.1-201ENST00000572284 509 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC107982.3-201ENST00000584957 985 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 VN1R78P-201ENST00000597393 564 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 YWHAQP7-201ENST00000603536 658 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 AC231759.1-201ENST00000616455 597 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 AC019226.2-201ENST00000625973 424 ntBASIC4.57□□□□□ -1.68
NR1H2P55055 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
NR1H2P55055 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NR1H2P55055 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms