Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MRE11P49959 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MRE11P49959 Y_RNA.517-201ENST00000384551 106 ntBASIC5.71□□□□□ -1.5
MRE11P49959 VDAC2P1-201ENST00000399358 958 ntBASIC5.71□□□□□ -1.5
MRE11P49959 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.71□□□□□ -1.5
MRE11P49959 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 AC119751.6-201ENST00000416712 186 ntBASIC5.71□□□□□ -1.5
MRE11P49959 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.71□□□□□ -1.5
MRE11P49959 RGS17P1-201ENST00000423358 553 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC004975.1-201ENST00000428733 208 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.71□□□□□ -1.5
MRE11P49959 ATP5F1P1-201ENST00000433775 569 ntBASIC5.71□□□□□ -1.5
MRE11P49959 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.71□□□□□ -1.5
MRE11P49959 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 GTF2IP7-202ENST00000436677 309 ntBASIC5.71□□□□□ -1.5
MRE11P49959 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AC104634.1-201ENST00000452720 462 ntBASIC5.71□□□□□ -1.5
MRE11P49959 CALM1P2-201ENST00000452941 448 ntBASIC5.71□□□□□ -1.5
MRE11P49959 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 snoU13.20-201ENST00000459180 104 ntBASIC5.71□□□□□ -1.5
MRE11P49959 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AL024509.2-201ENST00000493462 493 ntBASIC5.71□□□□□ -1.5
MRE11P49959 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MRE11P49959 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.71□□□□□ -1.5
MRE11P49959 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AC044913.1-201ENST00000557200 430 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.71□□□□□ -1.5
MRE11P49959 SULT1C2P2-201ENST00000562517 294 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC074051.3-201ENST00000570238 358 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 MIR4270-201ENST00000581799 70 ntBASIC5.71□□□□□ -1.5
MRE11P49959 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 BNIP3P26-201ENST00000600827 554 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AL590392.1-201ENST00000604960 446 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AP000238.1-201ENST00000608759 426 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC019131.2-201ENST00000609071 870 ntBASIC5.71□□□□□ -1.5
MRE11P49959 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.71□□□□□ -1.5
MRE11P49959 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.71□□□□□ -1.5
MRE11P49959 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 AC087821.2-201ENST00000637086 450 ntBASIC5.71□□□□□ -1.5
MRE11P49959 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.71□□□□□ -1.5
MRE11P49959 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MRE11P49959 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
MRE11P49959 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
MRE11P49959 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 SEC63P2-201ENST00000503863 1939 ntBASIC5.7□□□□□ -1.5
MRE11P49959 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.7□□□□□ -1.5
MRE11P49959 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.7□□□□□ -1.5
MRE11P49959 RNU1-108P-201ENST00000362556 161 ntBASIC5.7□□□□□ -1.5
MRE11P49959 SNORA2.3-201ENST00000383920 135 ntBASIC5.7□□□□□ -1.5
MRE11P49959 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
MRE11P49959 DUTP5-201ENST00000406790 469 ntBASIC5.7□□□□□ -1.5
MRE11P49959 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.7□□□□□ -1.5
MRE11P49959 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 VTA1P1-201ENST00000414044 866 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.7□□□□□ -1.5
MRE11P49959 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
MRE11P49959 TXNP5-201ENST00000441043 315 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.7□□□□□ -1.5
MRE11P49959 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 RPL7P1-201ENST00000468161 747 ntBASIC5.7□□□□□ -1.5
MRE11P49959 RPL7P9-201ENST00000468715 747 ntBASIC5.7□□□□□ -1.5
MRE11P49959 RN7SL41P-201ENST00000476144 297 ntBASIC5.7□□□□□ -1.5
MRE11P49959 RPL7P18-201ENST00000478965 734 ntBASIC5.7□□□□□ -1.5
MRE11P49959 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.7□□□□□ -1.5
MRE11P49959 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 MTATP6P22-201ENST00000507369 598 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 HNRNPKP5-201ENST00000515300 253 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.7□□□□□ -1.5
MRE11P49959 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.7□□□□□ -1.5
MRE11P49959 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.7□□□□□ -1.5
MRE11P49959 AC092490.3-201ENST00000545370 572 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MRE11P49959 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.7□□□□□ -1.5
MRE11P49959 AC027104.1-201ENST00000563702 681 ntBASIC5.7□□□□□ -1.5
MRE11P49959 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms