Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC092809.1-201ENST00000441469 474 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 RNFT1P2-201ENST00000443064 757 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 HMGB1P5-202ENST00000451497 985 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 CLIC4P1-201ENST00000453177 535 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD4P46934 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.39□□□□□ -1.71
NEDD4P46934 SAP18P1-201ENST00000512058 390 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD4P46934 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD4P46934 MTCO1P49-201ENST00000523429 802 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 MED28P5-201ENST00000528254 438 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD4P46934 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD4P46934 AC006518.1-201ENST00000541449 943 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD4P46934 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD4P46934 AC112230.1-201ENST00000604342 547 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 BRDTP1-201ENST00000605735 677 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 AC092953.2-201ENST00000608000 699 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.39□□□□□ -1.71
NEDD4P46934 AP000943.4-201ENST00000622912 357 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD4P46934 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NEDD4P46934 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 AL606537.1-201ENST00000607258 2011 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 RNA5SP51-201ENST00000364750 119 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 ATP5F1P6-201ENST00000402768 767 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 RAB9AP3-201ENST00000412737 573 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 AL606495.1-201ENST00000422100 813 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 RPS12P5-201ENST00000423449 371 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD4P46934 HIGD1AP12-201ENST00000427832 281 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC018644.1-201ENST00000429934 551 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 AL158053.1-201ENST00000441503 453 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 RAB9AP1-201ENST00000449393 573 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC092902.1-201ENST00000486999 259 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC004069.2-201ENST00000505438 1114 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.38□□□□□ -1.71
NEDD4P46934 RNU6-1308P-201ENST00000516817 103 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.38□□□□□ -1.71
NEDD4P46934 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD4P46934 HNRNPCP4-201ENST00000571636 900 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC133552.5-201ENST00000604266 540 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AL049844.2-201ENST00000604280 628 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC110792.4-201ENST00000609843 298 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD4P46934 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD4P46934 AL391262.2-201ENST00000622466 494 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.38□□□□□ -1.71
NEDD4P46934 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NEDD4P46934 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NEDD4P46934 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD4P46934 ZNF285B-201ENST00000561698 1767 ntBASIC4.38□□□□□ -1.71
NEDD4P46934 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD4P46934 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 CASC19-284ENST00000642142 1868 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AL136520.1-201ENST00000600311 1322 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD4P46934 SNORA63.3-201ENST00000362682 132 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NEDD4P46934 RNU6ATAC-201ENST00000408749 126 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 RNA5SP498-201ENST00000411342 120 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AL512637.2-201ENST00000431287 1256 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AC007389.2-201ENST00000434630 306 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD4P46934 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 AL121877.1-201ENST00000453704 622 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD4P46934 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 HMGB3P13-201ENST00000511263 607 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD4P46934 TRMT10BP1-201ENST00000519377 943 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.37□□□□□ -1.71
NEDD4P46934 HAUS1P3-201ENST00000523909 662 ntBASIC4.37□□□□□ -1.71
NEDD4P46934 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD4P46934 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD4P46934 EIF1P6-201ENST00000600054 334 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms