Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 Y_RNA.61-201ENST00000362835 102 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 RNU6-560P-201ENST00000364007 108 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PDE6BP35913 RN7SKP106-201ENST00000410832 272 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 RNU2-41P-201ENST00000410991 178 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 USP9YP6-201ENST00000413550 854 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 TAF13P2-201ENST00000416876 286 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 RWDD4P2-201ENST00000426392 563 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 ETF1P3-201ENST00000430422 1160 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC093155.1-201ENST00000440164 826 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 RPL23AP76-201ENST00000441860 458 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 USP9YP34-201ENST00000453983 808 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 RPS20P4-201ENST00000461659 355 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC008837.2-201ENST00000513076 418 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.2□□□□□ -1.42
PDE6BP35913 RN7SKP122-201ENST00000515923 296 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 SNORA31.13-201ENST00000516624 135 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 RNU6-678P-201ENST00000516832 109 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 Y_RNA.702-201ENST00000516843 96 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.2□□□□□ -1.42
PDE6BP35913 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 EIF1P6-201ENST00000600054 334 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 AC068831.8-201ENST00000620171 435 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 AC009229.4-201ENST00000623854 1947 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 AC000367.1-201ENST00000452711 1766 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.2□□□□□ -1.42
PDE6BP35913 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDE6BP35913 MAPK10-328ENST00000641553 4009 ntBASIC6.2□□□□□ -1.42
PDE6BP35913 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDE6BP35913 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PDE6BP35913 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDE6BP35913 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.19□□□□□ -1.42
PDE6BP35913 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.19□□□□□ -1.42
PDE6BP35913 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDE6BP35913 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 AC010928.1-201ENST00000592477 1447 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDE6BP35913 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
PDE6BP35913 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 RNU4-76P-201ENST00000364509 141 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 SNORA70F-201ENST00000384142 135 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 Y_RNA.554-201ENST00000384672 102 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 HMGN1P14-201ENST00000412459 517 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 ISCA1P1-201ENST00000426679 387 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 MED14P1-201ENST00000430517 648 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 AC009238.2-201ENST00000431026 355 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDE6BP35913 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDE6BP35913 DNAJC19P4-201ENST00000440115 345 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 RPS29P9-201ENST00000440360 171 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 MTND4LP16-201ENST00000440828 295 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 MTND1P30-201ENST00000441241 901 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 RAB11AP1-201ENST00000442978 646 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.19□□□□□ -1.42
PDE6BP35913 AL592437.1-201ENST00000443781 492 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 AC114755.5-201ENST00000447760 831 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 SNRPGP9-201ENST00000456025 225 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 RPL23AP56-201ENST00000460778 453 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.19□□□□□ -1.42
PDE6BP35913 RN7SL809P-201ENST00000482040 297 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.19□□□□□ -1.42
PDE6BP35913 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.19□□□□□ -1.42
PDE6BP35913 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.19□□□□□ -1.42
PDE6BP35913 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.19□□□□□ -1.42
PDE6BP35913 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.19□□□□□ -1.42
PDE6BP35913 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.19□□□□□ -1.42
PDE6BP35913 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms