Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXC12P31275 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC12P31275 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC12P31275 MTND5P28-201ENST00000438005 1594 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC022325.1-201ENST00000502748 2199 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AOX3P-204ENST00000491025 2107 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC010329.2-201ENST00000595195 2737 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC12P31275 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC12P31275 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC12P31275 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC008033.1-201ENST00000216407 1162 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 AL161781.1-201ENST00000354277 403 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RNU6-28P-201ENST00000362378 107 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RNA5SP394-201ENST00000364216 119 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RNU6-282P-201ENST00000365357 103 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RNU11-201ENST00000387069 134 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 MIR937-201ENST00000401271 86 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 SNRPEP6-201ENST00000407465 277 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RN7SKP286-201ENST00000410894 299 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC116036.1-201ENST00000412199 367 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AMD1P2-201ENST00000412936 992 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 MTND3P17-201ENST00000416968 344 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC073136.2-201ENST00000417282 849 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC12P31275 EEF1A1P1-201ENST00000447052 739 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RPL23AP60-201ENST00000450011 454 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC073594.1-201ENST00000462065 364 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC104057.1-201ENST00000515547 497 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 Vault.3-201ENST00000516676 95 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 WBP1LP3-201ENST00000523033 208 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC123904.2-201ENST00000548059 300 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC079600.1-201ENST00000550326 297 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXC12P31275 MIR4489-201ENST00000578869 62 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 H3F3BP2-201ENST00000583907 357 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC020916.2-201ENST00000591242 360 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC12P31275 RPL12P25-202ENST00000598100 674 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AL360012.1-201ENST00000602813 131 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC073091.2-201ENST00000603205 907 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC005191.1-201ENST00000603950 358 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 SDR42E1P1-201ENST00000611327 477 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RNA5SP440-201ENST00000612665 119 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC116447.1-201ENST00000613153 453 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC109446.4-201ENST00000623235 2755 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AC008627.1-201ENST00000517511 1704 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
HOXC12P31275 AC130650.2-201ENST00000618736 2403 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 AP002512.4-202ENST00000641599 4530 ntBASIC5.33□□□□□ -1.56
HOXC12P31275 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC12P31275 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXC12P31275 RBPJP7-201ENST00000442803 1447 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 RBPJP5-201ENST00000449433 1447 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC010928.1-201ENST00000592477 1447 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL118496.1-201ENST00000440201 1812 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 AC005725.1-201ENST00000577346 2607 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 GVINP1-202ENST00000531871 7271 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC12P31275 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC12P31275 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXC12P31275 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC12P31275 CBX3P1-201ENST00000325243 554 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 Y_RNA.11-201ENST00000362375 109 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 RNU4-2-201ENST00000365668 141 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms