Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL139128.1-201ENST00000413921 941 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 TMBIM7P-201ENST00000418074 855 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RPL36AP10-201ENST00000421785 322 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RGS17P1-201ENST00000423358 553 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AL645608.4-201ENST00000423619 154 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ABCD3P28288 NRBF2P3-201ENST00000432731 865 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AC006466.1-201ENST00000438721 289 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AL772161.1-201ENST00000439130 476 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 TPTE2P3-201ENST00000441562 1189 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RPL23AP33-201ENST00000442301 452 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC098826.2-201ENST00000452011 651 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 NECAP1P2-201ENST00000455668 727 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 ANKRD26P4-201ENST00000455755 950 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 MTND2P14-201ENST00000482139 351 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.42□□□□□ -1.7
ABCD3P28288 HMGB3P16-201ENST00000508037 287 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 TMEM248P1-201ENST00000510579 951 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RN7SKP46-201ENST00000515942 234 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RNA5SP249-201ENST00000516127 99 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 RNU1-6P-201ENST00000516290 144 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.42□□□□□ -1.7
ABCD3P28288 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.42□□□□□ -1.7
ABCD3P28288 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.42□□□□□ -1.7
ABCD3P28288 DEFB109D-201ENST00000529497 240 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AC022882.1-201ENST00000532142 501 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ABCD3P28288 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ABCD3P28288 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ABCD3P28288 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.42□□□□□ -1.7
ABCD3P28288 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.42□□□□□ -1.7
ABCD3P28288 CYCSP40-201ENST00000575927 294 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AC069304.2-201ENST00000605154 435 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC131235.4-201ENST00000609288 620 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC078899.5-201ENST00000612475 178 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 AC079395.3-201ENST00000615161 484 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ABCD3P28288 MAPK10-263ENST00000641052 4307 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ABCD3P28288 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.42□□□□□ -1.7
ABCD3P28288 IQCB2P-201ENST00000401788 1633 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 AL390862.1-201ENST00000635467 1469 ntBASIC4.42□□□□□ -1.7
ABCD3P28288 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.42□□□□□ -1.7
ABCD3P28288 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.42□□□□□ -1.7
ABCD3P28288 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.42□□□□□ -1.7
ABCD3P28288 AP000776.1-201ENST00000530032 1663 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ABCD3P28288 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 LINC00561-201ENST00000565815 2738 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC068533.2-201ENST00000411872 306 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AL008987.1-201ENST00000415528 237 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 TIMM9P2-201ENST00000419324 266 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC006960.1-201ENST00000419980 153 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 RWDD4P2-201ENST00000426392 563 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC073143.1-201ENST00000436316 395 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 FGF7P5-201ENST00000441829 291 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.41□□□□□ -1.7
ABCD3P28288 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 AL590399.6-201ENST00000446396 307 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 H2AFZP5-201ENST00000446960 382 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 VN1R10P-201ENST00000447106 875 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC092757.1-201ENST00000467293 467 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 AC021146.5-201ENST00000503544 545 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 SCARNA22-201ENST00000503991 125 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 HMGB1P28-201ENST00000507778 552 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 PTGES3P3-201ENST00000511479 482 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC010587.2-201ENST00000511727 448 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC112673.1-201ENST00000513168 575 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 OR7H2P-201ENST00000513483 306 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 RN7SKP276-201ENST00000516242 268 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.41□□□□□ -1.7
ABCD3P28288 MRPS36P3-201ENST00000519284 130 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 AP001636.2-201ENST00000525517 696 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.41□□□□□ -1.7
ABCD3P28288 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.41□□□□□ -1.7
ABCD3P28288 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ABCD3P28288 AC093249.4-201ENST00000564755 259 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC091042.1-201ENST00000579213 173 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 AC005412.1-201ENST00000580812 1049 ntBASIC4.41□□□□□ -1.7
ABCD3P28288 RN7SL52P-201ENST00000584271 284 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms