Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.19□□□□□ -1.9
CTLA4P16410 TOMM20P2-201ENST00000540082 421 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AL049874.4-201ENST00000557593 255 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.19□□□□□ -1.9
CTLA4P16410 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 AP001180.3-201ENST00000582221 145 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC107982.3-201ENST00000584957 985 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.19□□□□□ -1.9
CTLA4P16410 VN1R85P-201ENST00000601587 426 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AL391834.1-201ENST00000609609 560 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTLA4P16410 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.19□□□□□ -1.9
CTLA4P16410 ASNSP1-204ENST00000641977 1664 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTLA4P16410 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.19□□□□□ -1.9
CTLA4P16410 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTLA4P16410 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.18□□□□□ -1.9
CTLA4P16410 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 AC007685.1-201ENST00000329806 452 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC007066.1-201ENST00000392902 381 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 AL136116.1-201ENST00000403591 381 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 MTND4P22-201ENST00000413116 1169 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RPL30P2-201ENST00000414021 291 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 MRPS18BP2-201ENST00000434310 759 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RPS26P40-201ENST00000435209 294 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.18□□□□□ -1.9
CTLA4P16410 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.18□□□□□ -1.9
CTLA4P16410 PPIAP17-201ENST00000438507 471 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 AL353093.1-201ENST00000441292 436 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.18□□□□□ -1.9
CTLA4P16410 BUD31P2-201ENST00000449374 300 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 SNRPGP5-201ENST00000456003 220 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RNU7-27P-201ENST00000459281 62 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RPL5P13-201ENST00000462840 709 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RPL23AP12-201ENST00000467573 473 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 FCF1P3-201ENST00000496394 590 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 UBE2CP3-201ENST00000502715 450 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.18□□□□□ -1.9
CTLA4P16410 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.18□□□□□ -1.9
CTLA4P16410 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.18□□□□□ -1.9
CTLA4P16410 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 AL049634.3-201ENST00000604968 457 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 AC024941.1-201ENST00000612250 334 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 AC099669.2-201ENST00000616549 437 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 AC116563.2-201ENST00000624751 535 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 RPS4XP5-202ENST00000449995 1334 ntBASIC3.18□□□□□ -1.9
CTLA4P16410 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTLA4P16410 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
CTLA4P16410 AC106871.1-201ENST00000568324 3102 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.17□□□□□ -1.9
CTLA4P16410 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 RNU6-670P-201ENST00000364312 104 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTLA4P16410 AMD1P2-201ENST00000412936 992 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 OSTCP5-201ENST00000425293 453 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 AC068587.1-201ENST00000483613 781 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 ACTG1P13-201ENST00000486987 1043 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 RANP9-201ENST00000519957 271 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.17□□□□□ -1.9
CTLA4P16410 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 SS18L2P2-201ENST00000583960 235 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AC009303.3-201ENST00000591103 736 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 AC110741.2-201ENST00000605278 268 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.17□□□□□ -1.9
CTLA4P16410 AL713922.2-201ENST00000619384 716 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms