Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.39□□□□□ -1.87
VCANP13611 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.39□□□□□ -1.87
VCANP13611 UBL5P2-201ENST00000583788 219 ntBASIC3.39□□□□□ -1.87
VCANP13611 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.39□□□□□ -1.87
VCANP13611 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
VCANP13611 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.39□□□□□ -1.87
VCANP13611 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.39□□□□□ -1.87
VCANP13611 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.39□□□□□ -1.87
VCANP13611 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.39□□□□□ -1.87
VCANP13611 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.39□□□□□ -1.87
VCANP13611 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
VCANP13611 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCANP13611 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 RSL24D1P1-201ENST00000404972 493 ntBASIC3.38□□□□□ -1.87
VCANP13611 HMGN2P27-201ENST00000427352 270 ntBASIC3.38□□□□□ -1.87
VCANP13611 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 AC010503.3-201ENST00000594355 540 ntBASIC3.38□□□□□ -1.87
VCANP13611 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
VCANP13611 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VCANP13611 AC138832.1-201ENST00000522871 556 ntBASIC3.38□□□□□ -1.87
VCANP13611 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 AC015871.5-202ENST00000623252 701 ntBASIC3.38□□□□□ -1.87
VCANP13611 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 DPPA2P2-201ENST00000418220 897 ntBASIC3.38□□□□□ -1.87
VCANP13611 AC007563.3-201ENST00000433233 371 ntBASIC3.38□□□□□ -1.87
VCANP13611 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
VCANP13611 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.38□□□□□ -1.87
VCANP13611 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 AL773545.4-201ENST00000637262 310 ntBASIC3.38□□□□□ -1.87
VCANP13611 AL513478.4-201ENST00000641636 310 ntBASIC3.38□□□□□ -1.87
VCANP13611 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.38□□□□□ -1.87
VCANP13611 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.38□□□□□ -1.87
VCANP13611 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCANP13611 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.37□□□□□ -1.87
VCANP13611 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VCANP13611 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VCANP13611 RNA5SP99-201ENST00000364020 114 ntBASIC3.37□□□□□ -1.87
VCANP13611 TRIM60P18-201ENST00000441518 828 ntBASIC3.37□□□□□ -1.87
VCANP13611 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.37□□□□□ -1.87
VCANP13611 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.37□□□□□ -1.87
VCANP13611 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AC128687.2-201ENST00000609657 566 ntBASIC3.37□□□□□ -1.87
VCANP13611 AL354950.1-201ENST00000614150 568 ntBASIC3.37□□□□□ -1.87
VCANP13611 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 AL353692.2-201ENST00000407054 335 ntBASIC3.37□□□□□ -1.87
VCANP13611 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 ARL4AP3-201ENST00000441452 574 ntBASIC3.37□□□□□ -1.87
VCANP13611 VN1R40P-201ENST00000455196 941 ntBASIC3.37□□□□□ -1.87
VCANP13611 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 SNORD53-201ENST00000579969 78 ntBASIC3.37□□□□□ -1.87
VCANP13611 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.37□□□□□ -1.87
VCANP13611 AC012603.1-201ENST00000606424 528 ntBASIC3.37□□□□□ -1.87
VCANP13611 AL162574.2-201ENST00000614618 657 ntBASIC3.37□□□□□ -1.87
VCANP13611 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VCANP13611 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VCANP13611 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.37□□□□□ -1.87
VCANP13611 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.37□□□□□ -1.87
VCANP13611 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AC087888.1-201ENST00000550884 1254 ntBASIC3.37□□□□□ -1.87
VCANP13611 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.37□□□□□ -1.87
VCANP13611 AC018552.3-201ENST00000567416 561 ntBASIC3.37□□□□□ -1.87
VCANP13611 MTND6P33-201ENST00000571794 183 ntBASIC3.37□□□□□ -1.87
VCANP13611 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
VCANP13611 AC134882.1-201ENST00000603738 1676 ntBASIC3.36□□□□□ -1.87
VCANP13611 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms