Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 MAPK10-372ENST00000641954 3413 ntBASIC4.42□□□□□ -1.7
TOP1P11387 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TOP1P11387 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 SNORA48.7-201ENST00000391302 135 ntBASIC4.42□□□□□ -1.7
TOP1P11387 PTMAP2-201ENST00000397627 327 ntBASIC4.42□□□□□ -1.7
TOP1P11387 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 SETD6P1-201ENST00000444575 317 ntBASIC4.42□□□□□ -1.7
TOP1P11387 HMGB1P26-201ENST00000452520 628 ntBASIC4.42□□□□□ -1.7
TOP1P11387 RPL21P129-201ENST00000491732 478 ntBASIC4.42□□□□□ -1.7
TOP1P11387 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
TOP1P11387 AC010285.3-201ENST00000511668 676 ntBASIC4.42□□□□□ -1.7
TOP1P11387 RN7SKP82-201ENST00000516786 223 ntBASIC4.42□□□□□ -1.7
TOP1P11387 TRMT10BP1-201ENST00000519377 943 ntBASIC4.42□□□□□ -1.7
TOP1P11387 OR4A2P-201ENST00000527276 913 ntBASIC4.42□□□□□ -1.7
TOP1P11387 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.42□□□□□ -1.7
TOP1P11387 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 AP001180.3-201ENST00000582221 145 ntBASIC4.42□□□□□ -1.7
TOP1P11387 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.42□□□□□ -1.7
TOP1P11387 AL137849.1-201ENST00000604767 169 ntBASIC4.42□□□□□ -1.7
TOP1P11387 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP1P11387 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TOP1P11387 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP1P11387 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TOP1P11387 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TOP1P11387 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TOP1P11387 RNU6-185P-201ENST00000384421 107 ntBASIC4.41□□□□□ -1.7
TOP1P11387 HMGN2P8-201ENST00000391458 268 ntBASIC4.41□□□□□ -1.7
TOP1P11387 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 AL606490.7-201ENST00000433136 191 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AC044797.1-201ENST00000445744 679 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AC007537.2-201ENST00000472093 511 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AP002812.1-201ENST00000495378 474 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP1P11387 PAICSP4-201ENST00000517543 1253 ntBASIC4.41□□□□□ -1.7
TOP1P11387 IGHV3-32-201ENST00000519182 355 ntBASIC4.41□□□□□ -1.7
TOP1P11387 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP1P11387 AC084033.1-201ENST00000550830 633 ntBASIC4.41□□□□□ -1.7
TOP1P11387 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.41□□□□□ -1.7
TOP1P11387 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.41□□□□□ -1.7
TOP1P11387 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP1P11387 EIF1P6-201ENST00000600054 334 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP1P11387 AC090525.3-201ENST00000605601 189 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AC005972.3-201ENST00000606304 481 ntBASIC4.41□□□□□ -1.7
TOP1P11387 RNU1-30P-201ENST00000606575 163 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AL391497.1-201ENST00000608671 547 ntBASIC4.41□□□□□ -1.7
TOP1P11387 AL391597.1-201ENST00000618707 694 ntBASIC4.41□□□□□ -1.7
TOP1P11387 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP1P11387 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP1P11387 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP1P11387 LINC00561-201ENST00000565815 2738 ntBASIC4.41□□□□□ -1.7
TOP1P11387 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP1P11387 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TOP1P11387 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TOP1P11387 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TOP1P11387 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.4□□□□□ -1.7
TOP1P11387 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TOP1P11387 AC007066.1-201ENST00000392902 381 ntBASIC4.4□□□□□ -1.71
TOP1P11387 SOD2P1-201ENST00000396543 562 ntBASIC4.4□□□□□ -1.71
TOP1P11387 ATP5F1P3-201ENST00000397213 657 ntBASIC4.4□□□□□ -1.71
TOP1P11387 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TOP1P11387 AMD1P2-201ENST00000412936 992 ntBASIC4.4□□□□□ -1.71
TOP1P11387 OR5AW1P-201ENST00000426334 1006 ntBASIC4.4□□□□□ -1.71
TOP1P11387 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.4□□□□□ -1.71
TOP1P11387 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.4□□□□□ -1.71
TOP1P11387 AL353093.1-201ENST00000441292 436 ntBASIC4.4□□□□□ -1.71
TOP1P11387 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.4□□□□□ -1.71
TOP1P11387 MTND2P8-201ENST00000450555 1025 ntBASIC4.4□□□□□ -1.71
TOP1P11387 RN7SL93P-201ENST00000463035 293 ntBASIC4.4□□□□□ -1.71
TOP1P11387 AC091917.2-201ENST00000505002 744 ntBASIC4.4□□□□□ -1.71
TOP1P11387 RNA5SP208-201ENST00000516156 78 ntBASIC4.4□□□□□ -1.71
TOP1P11387 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.4□□□□□ -1.71
TOP1P11387 AC007424.1-203ENST00000554613 687 ntBASIC4.4□□□□□ -1.71
TOP1P11387 AC141257.3-201ENST00000572906 215 ntBASIC4.4□□□□□ -1.71
TOP1P11387 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.4□□□□□ -1.71
TOP1P11387 AC015911.5-201ENST00000587076 451 ntBASIC4.4□□□□□ -1.71
TOP1P11387 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.4□□□□□ -1.71
TOP1P11387 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.4□□□□□ -1.71
TOP1P11387 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TOP1P11387 AC004943.3-201ENST00000624116 600 ntBASIC4.4□□□□□ -1.71
TOP1P11387 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TOP1P11387 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TOP1P11387 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TOP1P11387 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
TOP1P11387 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TOP1P11387 RNU1-18P-201ENST00000363062 164 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms