Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.14□□□□□ -1.75
COL1A1P02452 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.14□□□□□ -1.75
COL1A1P02452 AC092868.3-201ENST00000560515 784 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.14□□□□□ -1.75
COL1A1P02452 AC099654.11-201ENST00000638857 294 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 CR381670.1-201ENST00000624291 1693 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL1A1P02452 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.14□□□□□ -1.75
COL1A1P02452 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL1A1P02452 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
COL1A1P02452 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL1A1P02452 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL1A1P02452 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.13□□□□□ -1.75
COL1A1P02452 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL1A1P02452 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.13□□□□□ -1.75
COL1A1P02452 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC002075.2-201ENST00000425207 252 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC099560.2-201ENST00000457554 255 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 FTH1P9-201ENST00000513251 355 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 IGHV3-32-201ENST00000519182 355 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 DUXAP6-201ENST00000553858 601 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AL121576.1-201ENST00000556055 276 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AL390334.1-201ENST00000556395 450 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC099489.2-201ENST00000574976 260 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC124312.4-201ENST00000605533 310 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AC107294.1-201ENST00000609524 467 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC233263.6-201ENST00000631132 1963 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 AC024341.1-201ENST00000526444 1552 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL1A1P02452 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
COL1A1P02452 AC068647.1-201ENST00000489539 2265 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 Z83843.1-201ENST00000604070 3685 ntBASIC4.13□□□□□ -1.75
COL1A1P02452 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL1A1P02452 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL1A1P02452 Z99755.1-201ENST00000414048 380 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.12□□□□□ -1.75
COL1A1P02452 SKP1P1-201ENST00000438081 489 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 AC127537.2-201ENST00000439258 465 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 AP001992.1-205ENST00000462248 379 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 RN7SL429P-201ENST00000479090 223 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.12□□□□□ -1.75
COL1A1P02452 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.12□□□□□ -1.75
COL1A1P02452 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.12□□□□□ -1.75
COL1A1P02452 EIF4BP1-201ENST00000554881 351 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.12□□□□□ -1.75
COL1A1P02452 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.12□□□□□ -1.75
COL1A1P02452 AC010680.3-201ENST00000604215 520 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 AC073657.2-201ENST00000605661 303 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
COL1A1P02452 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL1A1P02452 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
COL1A1P02452 NMD3P1-201ENST00000439704 1488 ntBASIC4.12□□□□□ -1.75
COL1A1P02452 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL1A1P02452 RNU1-70P-201ENST00000362618 164 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 Y_RNA.510-201ENST00000384511 114 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AL034403.1-201ENST00000399414 885 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 RN7SKP284-201ENST00000411002 343 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 RPL7P44-201ENST00000424827 742 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 RPL7P23-201ENST00000493874 747 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AC097462.2-201ENST00000504623 481 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.11□□□□□ -1.75
COL1A1P02452 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.11□□□□□ -1.75
COL1A1P02452 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 KC877982.1-201ENST00000602313 470 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AC015802.5-201ENST00000607478 399 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL1A1P02452 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 HSPA8P19-201ENST00000505359 1517 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL1A1P02452 AC119744.1-201ENST00000454746 1715 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.11□□□□□ -1.75
COL1A1P02452 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL1A1P02452 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.11□□□□□ -1.75
COL1A1P02452 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.11□□□□□ -1.75
COL1A1P02452 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.11□□□□□ -1.75
COL1A1P02452 AL445213.1-201ENST00000412589 747 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 RPL6P21-201ENST00000418672 846 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.11□□□□□ -1.75
COL1A1P02452 AL671855.1-201ENST00000446875 1203 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.11□□□□□ -1.75
COL1A1P02452 RN7SL504P-201ENST00000494496 287 ntBASIC4.11□□□□□ -1.75
COL1A1P02452 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.11□□□□□ -1.75
COL1A1P02452 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.11□□□□□ -1.75
COL1A1P02452 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.11□□□□□ -1.75
COL1A1P02452 AC006946.3-201ENST00000609791 756 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms