Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 RNU6-251P-201ENST00000363235 104 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 MIR192-201ENST00000384915 110 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 MIR1284-201ENST00000408337 120 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 CEACAMP8-201ENST00000413902 580 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC00993-201ENST00000420453 540 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 MTND2P20-201ENST00000440805 661 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 TRIM60P18-201ENST00000441518 828 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC004865.1-201ENST00000442276 1003 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AP000936.2-201ENST00000447151 681 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC009963.2-201ENST00000453431 138 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC112206.1-201ENST00000468416 477 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 AC072039.1-201ENST00000477611 581 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 SETP14-201ENST00000497538 873 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 CBX3P3-201ENST00000508108 532 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC110775.1-201ENST00000513721 462 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 MTCO1P30-201ENST00000515244 580 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 RNA5SP249-201ENST00000516127 99 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 RNU6-347P-201ENST00000516658 105 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC068714.1-201ENST00000559623 800 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC074050.1-201ENST00000563247 211 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC012414.6-201ENST00000568241 401 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC115085.1-201ENST00000588924 229 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC011487.3-201ENST00000593607 453 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC078795.2-201ENST00000602835 1252 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC090181.2-201ENST00000602975 672 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AC106028.5-201ENST00000610332 395 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 uc_338.18-201ENST00000615451 175 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AL121890.2-201ENST00000617644 465 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 AL359740.1-201ENST00000624340 592 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 AL356473.1-201ENST00000406203 1408 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS4BO75351 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 AC104260.2-201ENST00000623551 3497 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 OR55B1P-203ENST00000641518 2602 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS4BO75351 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS4BO75351 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 RNU6-216P-201ENST00000363282 104 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 U3.4-201ENST00000363352 213 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 RNU6-115P-201ENST00000364310 107 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 OR5H15-201ENST00000383696 930 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 SNORA51.8-201ENST00000384234 132 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 MIR506-201ENST00000384998 124 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 SNORA11-201ENST00000408789 128 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC234782.4-201ENST00000417646 1048 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC062016.2-201ENST00000420950 676 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 C4BPAP2-201ENST00000428434 478 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 USP9YP9-201ENST00000429406 715 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 RPL34P6-201ENST00000432390 345 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 MTND1P30-201ENST00000441241 901 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 KATNBL1P6-201ENST00000453433 915 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms