Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.18□□□□□ -1.74
ZIC3O60481 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ZIC3O60481 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.18□□□□□ -1.74
ZIC3O60481 AP003072.4-201ENST00000624580 310 ntBASIC4.18□□□□□ -1.74
ZIC3O60481 AC026634.1-201ENST00000634369 198 ntBASIC4.18□□□□□ -1.74
ZIC3O60481 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.18□□□□□ -1.74
ZIC3O60481 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.18□□□□□ -1.74
ZIC3O60481 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.18□□□□□ -1.74
ZIC3O60481 AC108467.2-201ENST00000617640 1597 ntBASIC4.18□□□□□ -1.74
ZIC3O60481 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 AC108751.5-201ENST00000492880 1336 ntBASIC4.18□□□□□ -1.74
ZIC3O60481 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ZIC3O60481 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ZIC3O60481 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ZIC3O60481 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC090017.1-201ENST00000548612 1779 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 MTND5P31-201ENST00000419366 1374 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ZIC3O60481 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 AC125257.1-201ENST00000560400 2930 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 RNU1-83P-201ENST00000363426 164 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ZIC3O60481 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 P2RY10P2-201ENST00000416730 913 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC009302.1-201ENST00000417147 390 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 OR6C64P-201ENST00000419708 825 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 RPL23AP1-201ENST00000428990 471 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 IFNNP1-201ENST00000429219 553 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC010881.1-201ENST00000433830 235 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AL162591.2-201ENST00000449634 317 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 ISCUP1-201ENST00000454451 448 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 BZW1P2-201ENST00000473537 826 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 RN7SL809P-201ENST00000482040 297 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC082651.2-201ENST00000496833 166 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC111000.2-201ENST00000507775 550 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC111000.3-201ENST00000508057 576 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 HSPE1P23-201ENST00000509838 286 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 RPL7L1P13-201ENST00000511702 739 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 OR5BM1P-201ENST00000512021 366 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 MTCO3P28-201ENST00000513351 515 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 HNRNPKP5-201ENST00000515300 253 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 RNU6-488P-201ENST00000515918 99 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 SNORA48.10-201ENST00000516965 160 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 RNU6-1261P-201ENST00000517194 104 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 AP001781.1-201ENST00000530977 207 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 SERPINE4P-201ENST00000554978 281 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 AP005136.1-201ENST00000579765 429 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC124312.4-201ENST00000605533 310 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AC245008.1-201ENST00000608123 476 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 AL136295.6-201ENST00000610486 658 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC068137.4-201ENST00000638485 296 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ZIC3O60481 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.17□□□□□ -1.74
ZIC3O60481 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 AC005332.5-201ENST00000591222 2919 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 AC107982.1-201ENST00000507171 1300 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms