Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SSSCA1O60232 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.75□□□□□ -1.97
SSSCA1O60232 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 AL583834.1-201ENST00000406943 343 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RNA5SP317-201ENST00000410176 116 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RNA5SP311-201ENST00000411290 116 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RPL32P35-201ENST00000415214 394 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AC245028.1-201ENST00000423259 256 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.75□□□□□ -1.97
SSSCA1O60232 AL133162.1-201ENST00000463228 453 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AC091564.1-201ENST00000464563 479 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 TMED11P-201ENST00000479478 690 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.75□□□□□ -1.97
SSSCA1O60232 TPT1P3-201ENST00000492841 512 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RNA5SP315-201ENST00000516340 116 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RNA5SP312-201ENST00000517068 116 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.75□□□□□ -1.97
SSSCA1O60232 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 OR8X1P-201ENST00000534542 869 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AL845331.3-202ENST00000562856 261 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AC007687.1-201ENST00000602704 304 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AL096803.3-201ENST00000609032 532 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AC107294.3-201ENST00000609211 526 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 AC073476.4-201ENST00000628409 72 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.75□□□□□ -1.97
SSSCA1O60232 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.75□□□□□ -1.97
SSSCA1O60232 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 AC093908.1-201ENST00000623125 8092 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.74□□□□□ -1.97
SSSCA1O60232 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC090337.1-201ENST00000579651 2074 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 SPRR2C-201ENST00000290702 219 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 OR4A15-201ENST00000314706 1035 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 RPL32P23-201ENST00000397237 405 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 RSL24D1P1-201ENST00000404972 493 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SSSCA1O60232 DBIP2-201ENST00000419076 262 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 YY1P1-201ENST00000427625 668 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AL117339.2-201ENST00000430475 180 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 RAB9AP5-201ENST00000437794 597 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AC092013.1-201ENST00000438795 332 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AL138799.3-201ENST00000438968 350 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 RAB9AP2-201ENST00000443911 597 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AC115115.1-201ENST00000449927 248 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.74□□□□□ -1.97
SSSCA1O60232 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC012170.1-201ENST00000495139 359 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC093853.1-201ENST00000515689 483 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 RNA5SP217-201ENST00000515959 91 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 RNU1-143P-201ENST00000516296 146 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 Vault.1-201ENST00000516474 102 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 SNORA70.18-201ENST00000516696 98 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 SCARNA20.6-201ENST00000517251 106 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 OR5D17P-201ENST00000531492 978 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.74□□□□□ -1.97
SSSCA1O60232 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC067852.3-201ENST00000589177 561 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 U1.23-201ENST00000610293 146 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 RNU1-68P-201ENST00000615382 146 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 MLECP1-201ENST00000615893 709 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AC009318.3-201ENST00000616916 503 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
SSSCA1O60232 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 U1.39-201ENST00000621562 146 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AL354798.1-201ENST00000622505 329 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSSCA1O60232 AC138915.3-201ENST00000562908 1389 ntBASIC2.74□□□□□ -1.97
SSSCA1O60232 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SSSCA1O60232 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SSSCA1O60232 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSSCA1O60232 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.73□□□□□ -1.97
SSSCA1O60232 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSSCA1O60232 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.73□□□□□ -1.97
SSSCA1O60232 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSSCA1O60232 SNORA70C-201ENST00000384538 135 ntBASIC2.73□□□□□ -1.97
SSSCA1O60232 MIR124-3-201ENST00000384866 87 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms