Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 AC046144.1-201ENST00000478559 1853 ntBASIC4.47□□□□□ -1.69
LDB2O43679 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LDB2O43679 SGO1P1-201ENST00000603525 1447 ntBASIC4.46□□□□□ -1.69
LDB2O43679 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LDB2O43679 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LDB2O43679 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.46□□□□□ -1.69
LDB2O43679 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.69
LDB2O43679 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
LDB2O43679 OR52E6-202ENST00000379946 954 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RNU1-44P-201ENST00000384453 163 ntBASIC4.46□□□□□ -1.7
LDB2O43679 MIR16-1-201ENST00000385271 89 ntBASIC4.46□□□□□ -1.7
LDB2O43679 SNORA74C-2-201ENST00000411179 201 ntBASIC4.46□□□□□ -1.7
LDB2O43679 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.46□□□□□ -1.7
LDB2O43679 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.46□□□□□ -1.7
LDB2O43679 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.46□□□□□ -1.7
LDB2O43679 USP9YP31-201ENST00000431405 881 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RPS24P8-201ENST00000431490 402 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AC005345.1-201ENST00000431868 217 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RPL21P110-201ENST00000433345 446 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.46□□□□□ -1.7
LDB2O43679 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LDB2O43679 AL117351.1-201ENST00000438864 766 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 MTND5P2-201ENST00000442927 1142 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RPS27AP15-201ENST00000447672 466 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RPL7L1P1-201ENST00000448259 785 ntBASIC4.46□□□□□ -1.7
LDB2O43679 MTND2P28-201ENST00000457540 1044 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.46□□□□□ -1.7
LDB2O43679 AC093267.1-201ENST00000489176 961 ntBASIC4.46□□□□□ -1.7
LDB2O43679 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 MTND1P22-201ENST00000510572 951 ntBASIC4.46□□□□□ -1.7
LDB2O43679 OR5BM1P-201ENST00000512021 366 ntBASIC4.46□□□□□ -1.7
LDB2O43679 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 BNIP3P26-201ENST00000600827 554 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
LDB2O43679 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.46□□□□□ -1.7
LDB2O43679 AC023509.5-201ENST00000617434 807 ntBASIC4.46□□□□□ -1.7
LDB2O43679 MIR6758-201ENST00000620653 63 ntBASIC4.46□□□□□ -1.7
LDB2O43679 RAD17P1-201ENST00000418130 2042 ntBASIC4.46□□□□□ -1.7
LDB2O43679 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
LDB2O43679 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.7
LDB2O43679 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
LDB2O43679 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDB2O43679 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LDB2O43679 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDB2O43679 HMGB1P5-201ENST00000255320 642 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RPL32P3-201ENST00000359025 275 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RNU1-130P-201ENST00000363930 160 ntBASIC4.45□□□□□ -1.7
LDB2O43679 SNORA62-201ENST00000365493 153 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RNA5SP372-201ENST00000390836 115 ntBASIC4.45□□□□□ -1.7
LDB2O43679 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 AL078604.1-201ENST00000404609 466 ntBASIC4.45□□□□□ -1.7
LDB2O43679 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 AC009237.10-201ENST00000414112 510 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AL139095.3-201ENST00000419672 1203 ntBASIC4.45□□□□□ -1.7
LDB2O43679 PAICSP7-201ENST00000419829 962 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AC011233.1-201ENST00000422812 283 ntBASIC4.45□□□□□ -1.7
LDB2O43679 GTF2IP23-201ENST00000423746 351 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RPL23AP1-201ENST00000428990 471 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 RPEP2-201ENST00000432149 701 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 YWHAZP7-201ENST00000436906 631 ntBASIC4.45□□□□□ -1.7
LDB2O43679 USP9YP22-201ENST00000438971 294 ntBASIC4.45□□□□□ -1.7
LDB2O43679 UBE2V1P3-201ENST00000439651 417 ntBASIC4.45□□□□□ -1.7
LDB2O43679 RPL23AP76-201ENST00000441860 458 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.45□□□□□ -1.7
LDB2O43679 TPT1P12-201ENST00000448968 492 ntBASIC4.45□□□□□ -1.7
LDB2O43679 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 RPL21P134-201ENST00000453468 483 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.45□□□□□ -1.7
LDB2O43679 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AC005008.1-201ENST00000456151 612 ntBASIC4.45□□□□□ -1.7
LDB2O43679 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.45□□□□□ -1.7
LDB2O43679 RPS27AP17-201ENST00000463344 455 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC053481.1-201ENST00000467217 306 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AL161747.1-201ENST00000480068 358 ntBASIC4.45□□□□□ -1.7
LDB2O43679 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.45□□□□□ -1.7
LDB2O43679 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms