Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
SGCEO43556 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.43□□□□□ -1.86
SGCEO43556 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SGCEO43556 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.43□□□□□ -1.86
SGCEO43556 SEPT7P7-201ENST00000420492 1301 ntBASIC3.43□□□□□ -1.86
SGCEO43556 ZNF542P-204ENST00000482727 1305 ntBASIC3.43□□□□□ -1.86
SGCEO43556 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SGCEO43556 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SGCEO43556 RNA5SP97-201ENST00000365006 84 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.42□□□□□ -1.86
SGCEO43556 Z97055.1-201ENST00000419730 712 ntBASIC3.42□□□□□ -1.86
SGCEO43556 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.42□□□□□ -1.86
SGCEO43556 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.42□□□□□ -1.86
SGCEO43556 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.42□□□□□ -1.86
SGCEO43556 Z85994.2-201ENST00000434327 452 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AL138799.3-201ENST00000438968 350 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.42□□□□□ -1.86
SGCEO43556 MTCO3P16-201ENST00000454456 754 ntBASIC3.42□□□□□ -1.86
SGCEO43556 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.42□□□□□ -1.86
SGCEO43556 RPS3AP6-201ENST00000484430 795 ntBASIC3.42□□□□□ -1.86
SGCEO43556 PCNAP1-201ENST00000505363 709 ntBASIC3.42□□□□□ -1.86
SGCEO43556 BTF3L4P4-201ENST00000506381 449 ntBASIC3.42□□□□□ -1.86
SGCEO43556 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.42□□□□□ -1.86
SGCEO43556 MTCO1P35-201ENST00000515270 228 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.42□□□□□ -1.86
SGCEO43556 AC087369.1-201ENST00000520775 996 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
SGCEO43556 HIGD1AP5-201ENST00000529959 259 ntBASIC3.42□□□□□ -1.86
SGCEO43556 YPEL5P3-201ENST00000547227 352 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.42□□□□□ -1.86
SGCEO43556 AC120057.2-201ENST00000571520 271 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 AC069304.3-201ENST00000603938 1084 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AL590392.1-201ENST00000604960 446 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AL392112.1-201ENST00000605115 829 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC083809.1-201ENST00000615051 472 ntBASIC3.42□□□□□ -1.86
SGCEO43556 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SGCEO43556 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SGCEO43556 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.42□□□□□ -1.86
SGCEO43556 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SGCEO43556 MTND4P31-201ENST00000425607 1343 ntBASIC3.42□□□□□ -1.86
SGCEO43556 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
SGCEO43556 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SGCEO43556 AL353746.1-201ENST00000566293 6881 ntBASIC3.41□□□□□ -1.86
SGCEO43556 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 SPRR2C-201ENST00000290702 219 ntBASIC3.41□□□□□ -1.86
SGCEO43556 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SGCEO43556 AC068538.1-201ENST00000376856 336 ntBASIC3.41□□□□□ -1.86
SGCEO43556 RNU6-356P-201ENST00000384140 107 ntBASIC3.41□□□□□ -1.86
SGCEO43556 HNRNPDP2-201ENST00000406475 478 ntBASIC3.41□□□□□ -1.86
SGCEO43556 Y_RNA.625-201ENST00000411256 107 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.41□□□□□ -1.86
SGCEO43556 RNF19BPX-201ENST00000426224 625 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC006326.1-201ENST00000445465 787 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AL500522.2-201ENST00000448562 343 ntBASIC3.41□□□□□ -1.86
SGCEO43556 RPS17P13-201ENST00000448974 407 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.41□□□□□ -1.86
SGCEO43556 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.41□□□□□ -1.86
SGCEO43556 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC016550.3-201ENST00000515706 767 ntBASIC3.41□□□□□ -1.86
SGCEO43556 RNU2-58P-201ENST00000516403 183 ntBASIC3.41□□□□□ -1.86
SGCEO43556 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
SGCEO43556 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.41□□□□□ -1.86
SGCEO43556 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.41□□□□□ -1.86
SGCEO43556 HIGD1AP10-201ENST00000527837 282 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.41□□□□□ -1.86
SGCEO43556 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.41□□□□□ -1.86
SGCEO43556 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
SGCEO43556 AC023158.1-201ENST00000561632 1025 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.41□□□□□ -1.86
SGCEO43556 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
SGCEO43556 AC112503.1-201ENST00000608436 391 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AL391597.1-201ENST00000618707 694 ntBASIC3.41□□□□□ -1.86
SGCEO43556 MIR6500-201ENST00000622700 86 ntBASIC3.41□□□□□ -1.86
SGCEO43556 AC006065.5-201ENST00000623427 349 ntBASIC3.41□□□□□ -1.86
SGCEO43556 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SGCEO43556 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SGCEO43556 AC006504.1-201ENST00000562493 3666 ntBASIC3.4□□□□□ -1.86
SGCEO43556 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms