Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CDH12P2-201ENST00000504393 298 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC021146.7-201ENST00000509604 775 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.44□□□□□ -1.86
UPK1AO00322 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC084824.1-201ENST00000550917 1005 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC092868.3-201ENST00000560515 784 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC107982.3-201ENST00000584957 985 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.44□□□□□ -1.86
UPK1AO00322 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC010680.3-201ENST00000604215 520 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC024941.1-201ENST00000612250 334 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC099669.2-201ENST00000616549 437 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AL357559.1-201ENST00000622228 274 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1AO00322 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 SAGE2P-201ENST00000420011 2126 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
UPK1AO00322 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 RNU6-670P-201ENST00000364312 104 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 RNA5SP479-201ENST00000364858 117 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 RPL26P37-201ENST00000411983 438 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 AL158071.1-201ENST00000430315 461 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AL353898.1-201ENST00000444055 238 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 HMGB3P8-201ENST00000449709 577 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 AC084357.1-201ENST00000473404 255 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 AC026402.1-201ENST00000513642 170 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1AO00322 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 AC007991.1-201ENST00000522680 631 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AP001636.2-201ENST00000525517 696 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1AO00322 TGIF1P1-201ENST00000558095 802 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 SS18L2P2-201ENST00000583960 235 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 AC115621.1-201ENST00000604653 858 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AC007423.1-201ENST00000605009 627 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 AL451086.1-201ENST00000605596 223 ntBASIC3.43□□□□□ -1.86
UPK1AO00322 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1AO00322 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
UPK1AO00322 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1AO00322 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1AO00322 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 RNU6-819P-201ENST00000364116 107 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 MTHFD2P2-201ENST00000407725 247 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 RNU6-564P-201ENST00000410983 104 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.42□□□□□ -1.86
UPK1AO00322 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 RPS12P23-201ENST00000419579 400 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC009965.2-201ENST00000425328 970 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 RNF19BPX-201ENST00000426224 625 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AC073069.1-201ENST00000428657 441 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AC007563.3-201ENST00000433233 371 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1AO00322 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1AO00322 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1AO00322 ANP32BP2-201ENST00000454525 545 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 RPL23AP14-201ENST00000468281 468 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AL161747.1-201ENST00000480068 358 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.42□□□□□ -1.86
UPK1AO00322 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms