Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.3□□□□□ -1.72
CCDC188H7C350 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC188H7C350 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC188H7C350 AC107081.3-201ENST00000612715 2034 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AC025263.3-201ENST00000622965 1396 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC188H7C350 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 RNU6-549P-201ENST00000384433 107 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 MIR620-201ENST00000385232 95 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AL009174.1-201ENST00000426577 416 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AC011998.1-201ENST00000433403 117 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 ARF4P4-201ENST00000439608 520 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AL162388.1-201ENST00000450912 352 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC188H7C350 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 snoU13.7-201ENST00000459220 104 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 RN7SL860P-201ENST00000473738 223 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AC093801.2-201ENST00000503966 1050 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 SUMO2P5-201ENST00000506790 245 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AC010342.1-201ENST00000514047 877 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 RNU6-488P-201ENST00000515918 99 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 RNU7-143P-201ENST00000516781 65 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC188H7C350 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AC112503.1-201ENST00000608436 391 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 AL359535.1-201ENST00000612100 1087 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AC100827.5-201ENST00000615883 426 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 AC010872.1-201ENST00000624225 675 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC188H7C350 AL356118.1-201ENST00000635272 1078 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC188H7C350 AC012020.1-201ENST00000624541 1728 ntBASIC4.29□□□□□ -1.72
CCDC188H7C350 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC188H7C350 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC188H7C350 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC188H7C350 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC188H7C350 MTND4P9-201ENST00000507819 1346 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 EIF2AP4-201ENST00000424793 1781 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 RNU6-1151P-201ENST00000384684 107 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 RNA5SP36-201ENST00000410197 133 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 P2RY10P2-201ENST00000416730 913 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 MFSD13B-201ENST00000420133 1290 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC188H7C350 PSMA2P3-201ENST00000429685 675 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC133473.1-201ENST00000455173 299 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC188H7C350 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC109327.1-201ENST00000471666 403 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC119751.1-201ENST00000513357 765 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 RNA5SP143-201ENST00000516936 115 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 HIGD1AP6-201ENST00000521833 279 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC188H7C350 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 ZNF971P-201ENST00000562068 1249 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC022968.1-201ENST00000567372 442 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC188H7C350 AC022069.1-201ENST00000582910 658 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AL390816.3-201ENST00000604527 1066 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC115621.1-201ENST00000604653 858 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC188H7C350 AL133445.2-201ENST00000611191 527 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 MIR6820-201ENST00000611508 62 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 AC099669.2-201ENST00000616549 437 ntBASIC4.28□□□□□ -1.72
CCDC188H7C350 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC188H7C350 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC188H7C350 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC188H7C350 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC188H7C350 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 DCAF13P3-201ENST00000561147 1334 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms