Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AL357520.1-201ENST00000441557 453 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 HMGB3P22-202ENST00000451823 572 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 CABYRP1-201ENST00000465493 1045 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC091153.1-201ENST00000466297 402 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 RPS26P3-201ENST00000470205 348 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC090543.2-201ENST00000483963 348 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC004057.1-201ENST00000485827 348 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 SETP12-201ENST00000514068 805 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 RN7SKP13-201ENST00000515933 244 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 OR8I1P-201ENST00000529291 931 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC005242.1-201ENST00000585658 438 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AL139395.1-201ENST00000603662 160 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC016957.2-201ENST00000616998 848 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC009237.17-201ENST00000618111 748 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC244100.1-202ENST00000621554 382 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 AC091905.1-201ENST00000624400 311 ntBASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.94□□□□□ -1.78
SMIM28A0A1B0GU29 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC011155.1-201ENST00000316512 456 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 DPY19L1P2-201ENST00000426647 915 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 MTATP6P11-201ENST00000428071 670 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 CYCSP4-201ENST00000429682 331 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 NDUFB1P1-201ENST00000435191 180 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 ELOCP10-201ENST00000440624 327 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC023512.1-201ENST00000444513 499 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC073387.1-201ENST00000453261 709 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 RPL5P30-201ENST00000465511 891 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR9N1P-202ENST00000494289 481 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC109458.1-201ENST00000508858 316 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 SOD1P3-201ENST00000518682 454 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC004923.2-201ENST00000529649 369 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR5B10P-201ENST00000532869 642 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC068446.3-201ENST00000555285 382 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC068714.1-201ENST00000559623 800 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC018552.3-201ENST00000567416 561 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 CCDC58P3-201ENST00000590792 430 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 ELOCP34-201ENST00000604436 327 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC069200.1-201ENST00000609511 323 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AP006248.3-201ENST00000623580 594 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC004777.1-201ENST00000624317 287 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 AC090337.1-201ENST00000579651 2074 ntBASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
SMIM28A0A1B0GU29 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 LINC00561-201ENST00000565815 2738 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 MIR7-3-201ENST00000384898 110 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 RNA5SP44-201ENST00000410446 133 ntBASIC3.92□□□□□ -1.78
SMIM28A0A1B0GU29 RNU4-74P-201ENST00000411280 161 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms