Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TXNP6-201ENST00000510190 310 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 RAC1P2-201ENST00000511164 579 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC022695.1-201ENST00000522089 237 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 MIR4738-201ENST00000579134 87 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC006254.3-201ENST00000603353 884 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC005229.3-201ENST00000603438 323 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC034236.3-201ENST00000605999 461 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC099669.2-201ENST00000616549 437 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AL354798.1-201ENST00000622505 329 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC016717.3-201ENST00000624730 554 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 DCAF13P3-201ENST00000561147 1334 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AP004289.2-201ENST00000444413 1457 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AF127577.6-201ENST00000623352 2191 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 MFSD8-236ENST00000641509 4050 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AIMP1P1-201ENST00000418670 937 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 CACYBPP1-201ENST00000438592 684 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC087312.1-201ENST00000471411 480 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC103987.1-201ENST00000473394 348 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC068587.1-201ENST00000483613 781 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 MTCO1P30-201ENST00000515244 580 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 RNA5SP208-201ENST00000516156 78 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC008489.1-201ENST00000524271 483 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 MIR3160-1-201ENST00000577972 85 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC006270.2-201ENST00000578523 652 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC022916.3-201ENST00000592961 742 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC067959.1-201ENST00000604334 379 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AL163642.2-201ENST00000604722 1019 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 FP236240.3-201ENST00000623061 327 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC068724.3-201ENST00000625906 87 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 AC025125.1-201ENST00000624743 1922 ntBASIC2.8□□□□□ -1.96
HLA-DRB4X5D2U9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RNU6-805P-201ENST00000365643 106 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RNA5SP424-201ENST00000390988 115 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC136624.1-201ENST00000400791 413 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC007390.1-201ENST00000415722 356 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC017079.2-201ENST00000416102 485 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RPL17P36-201ENST00000420302 549 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL591419.1-201ENST00000427423 339 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 MOB1AP1-201ENST00000430903 535 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 SNORA71B-202ENST00000439232 272 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RPL12P26-201ENST00000452430 487 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AP002884.2-201ENST00000471647 395 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms