Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 Y_RNA.25-201ENST00000362528 102 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 RNU6-114P-201ENST00000384704 105 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 SNORA40.3-201ENST00000390964 122 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC104297.1-201ENST00000393779 870 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AL590290.1-201ENST00000405336 380 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 DUTP5-201ENST00000406790 469 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC109780.2-201ENST00000413467 845 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 USP9YP6-201ENST00000413550 854 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AIMP1P1-201ENST00000418670 937 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC000111.3-201ENST00000433478 193 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 BMS1P19-201ENST00000433925 393 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 RPL5P25-201ENST00000441148 775 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 SNRPEP8-201ENST00000442866 260 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 UBE2V1P7-201ENST00000446395 340 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 BX842559.2-201ENST00000451418 605 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 PRPF38AP1-201ENST00000451976 933 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 MTND2P24-201ENST00000453434 806 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 USP9YP34-201ENST00000453983 808 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC009127.1-201ENST00000467090 155 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 RPS3AP17-201ENST00000472594 777 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 HMGB1P36-201ENST00000487709 576 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 FAM92A1P2-202ENST00000504766 877 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 BNIP3P33-201ENST00000598912 569 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AL356055.1-201ENST00000602528 446 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC069304.2-201ENST00000605154 435 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC090527.3-201ENST00000619041 548 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC138649.3-201ENST00000622154 254 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 DDX18P4-201ENST00000511690 1966 ntBASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB4Q9Y5E5 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 ASNSP1-204ENST00000641977 1664 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 SNORA51.1-201ENST00000363243 140 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 RNU5E-5P-201ENST00000365379 116 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 RNA5SP187-201ENST00000384400 119 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 HMGB1P11-201ENST00000413899 637 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 HMGB3P23-201ENST00000414981 585 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC092634.6-201ENST00000418558 192 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 RPS27AP14-201ENST00000422868 454 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 VDAC1P6-201ENST00000430062 855 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 HMGB1P31-201ENST00000437242 427 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AL662791.1-201ENST00000441992 928 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 MTATP6P30-201ENST00000443540 664 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 SLC31A1P1-201ENST00000451221 567 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 SNRPFP4-201ENST00000456366 242 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 RPL5P22-201ENST00000480199 884 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AL049874.2-201ENST00000492636 288 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC091133.4-201ENST00000511142 308 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 SNORA48.10-201ENST00000516965 160 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 PAICSP4-201ENST00000517543 1253 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC006960.3-201ENST00000561845 705 ntBASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB4Q9Y5E5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms