Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTCO3P27-201ENST00000514397 196 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNU5A-7P-201ENST00000515979 116 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 SNORA31.9-201ENST00000516429 84 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AP003355.1-201ENST00000518956 587 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 IFITM8P-201ENST00000522529 394 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC068339.2-201ENST00000534395 618 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL442163.2-201ENST00000553912 710 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RN7SL622P-201ENST00000585292 275 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC068790.5-201ENST00000602741 355 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC020910.2-201ENST00000603635 610 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC078880.5-201ENST00000617845 421 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 MIR6715B-201ENST00000637172 77 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC138393.1-206ENST00000540997 1886 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP388-201ENST00000362584 119 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 SNORA70C-201ENST00000384538 135 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC092017.2-201ENST00000427600 362 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 FO393414.1-201ENST00000428697 1184 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC012497.1-201ENST00000429392 575 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC002542.1-201ENST00000440683 193 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 GXYLT1P1-201ENST00000446657 490 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 RAD23BP3-201ENST00000454157 1152 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 BX248409.1-201ENST00000455497 255 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP246-201ENST00000458909 119 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC006517.1-201ENST00000480485 328 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC090071.1-201ENST00000507713 644 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC093824.1-201ENST00000508796 343 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP154-201ENST00000516193 111 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC124293.1-201ENST00000530034 493 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC139103.1-201ENST00000534696 1030 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 TOMM20P2-201ENST00000540082 421 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AP000919.1-202ENST00000581139 1264 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 OR1AB1P-201ENST00000585564 761 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC105429.2-201ENST00000610567 517 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC023043.4-201ENST00000612081 449 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC078899.5-201ENST00000612475 178 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC068880.4-201ENST00000623082 495 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC008785.1-201ENST00000624475 456 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 DCAF13P3-201ENST00000561147 1334 ntBASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4BQ9Y4P1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC011266.1-201ENST00000624119 3569 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP52-201ENST00000362448 134 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP391-201ENST00000363456 119 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 SNORA37-201ENST00000384504 129 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 RPL22P22-201ENST00000395439 379 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 RAC1P3-201ENST00000416129 580 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC008065.1-201ENST00000428525 348 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC004975.1-201ENST00000428733 208 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 NUTF2P7-201ENST00000453086 375 ntBASIC3.92□□□□□ -1.78
ATG4BQ9Y4P1 MTND2P39-201ENST00000457230 764 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms