Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC135178.6-201ENST00000605314 398 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL162574.2-201ENST00000614618 657 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC008121.2-201ENST00000614647 523 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC011472.4-201ENST00000615848 491 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 SPRR2C-201ENST00000290702 219 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 HLFP1-201ENST00000402375 499 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 HSPE1P8-201ENST00000406997 288 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 USP9YP19-201ENST00000412165 485 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 MTATP6P11-201ENST00000428071 670 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AL160175.1-201ENST00000428124 247 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 ARL4AP4-201ENST00000434170 518 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 HMGB3P8-201ENST00000449709 577 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RPL7P48-201ENST00000461513 746 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RPL7P24-201ENST00000493052 752 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC025459.1-201ENST00000504072 156 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 COL6A4P2-205ENST00000509855 506 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC108064.1-201ENST00000513791 460 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RNA5SP179-201ENST00000517284 121 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 OR8K2P-201ENST00000524645 927 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC007423.1-201ENST00000605009 627 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC091167.4-201ENST00000605079 184 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AL365503.1-201ENST00000605247 905 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 MIR6810-201ENST00000622701 70 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 RNA5SP196-201ENST00000625967 102 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 AC024341.1-201ENST00000526444 1552 ntBASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAPPC4Q9Y296 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 RNU4-6P-201ENST00000410804 122 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 FTH1P6-201ENST00000430768 320 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC091390.1-201ENST00000433904 331 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MTCO1P52-201ENST00000433928 531 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 OR4C10P-201ENST00000434991 931 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AL513321.1-201ENST00000441175 761 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC017099.1-201ENST00000448261 1028 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AL162151.2-201ENST00000448875 158 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AL353718.1-201ENST00000451028 517 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 HMGB1P26-201ENST00000452520 628 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MTND2P6-201ENST00000455337 1030 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AP000926.1-201ENST00000479573 241 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC011037.1-201ENST00000483964 558 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 TPT1P3-201ENST00000492841 512 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC005912.1-201ENST00000495392 255 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 RN7SKP83-201ENST00000516512 178 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 HAUS1P3-201ENST00000523909 662 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms