Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CDRT1-208ENST00000630868 794 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 DCAF13P1-201ENST00000495256 1330 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 RNU6-452P-201ENST00000384406 107 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 MIR585-201ENST00000384887 94 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 CCNB2P1-201ENST00000399411 1150 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL022722.2-201ENST00000402519 180 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 SNORA57.3-201ENST00000411095 141 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC105402.2-201ENST00000438503 358 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC099563.1-201ENST00000456086 418 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 RPL23AP62-201ENST00000463396 453 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 RNU6-491P-201ENST00000516099 110 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 SCARNA14-201ENST00000516903 136 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 RNU6-352P-201ENST00000516908 107 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 PTP4A1P6-201ENST00000531034 478 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC120057.2-201ENST00000571520 271 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 MTND4LP24-201ENST00000572277 291 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 MIR5047-201ENST00000579212 100 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 PCNAP1-202ENST00000595299 752 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AL591034.3-201ENST00000605511 685 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC005962.2-201ENST00000611427 652 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 AC112484.5-201ENST00000624189 228 ntBASIC3.5□□□□□ -1.85
VAPAQ9P0L0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VAPAQ9P0L0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RNU6-819P-201ENST00000364116 107 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RNU6-152P-201ENST00000384037 107 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 PTMAP5-201ENST00000393073 333 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 USP9YP31-201ENST00000431405 881 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC074367.1-201ENST00000438685 1125 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AL645931.1-201ENST00000439737 410 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 UBDP1-202ENST00000457888 382 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC022034.3-201ENST00000471393 478 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC006463.2-201ENST00000473326 348 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RPL23AP73-201ENST00000492507 471 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 PCBP2P3-201ENST00000509726 843 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RN7SKP82-201ENST00000516786 223 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 EIF1AXP2-201ENST00000555940 413 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 TRAV15-201ENST00000556680 249 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 RNVU1-4-201ENST00000612985 164 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 MLECP1-201ENST00000615893 709 ntBASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms