Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNA5SP92-201ENST00000516437 110 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC069061.3-201ENST00000582254 823 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 MIR4737-201ENST00000583979 81 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AL031320.1-201ENST00000604177 357 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AL354984.3-201ENST00000604803 325 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC112220.2-201ENST00000605513 533 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AL365400.2-201ENST00000605604 902 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC095050.2-201ENST00000510748 1458 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 MTCO1P14-201ENST00000441695 1559 ntBASIC3.96□□□□□ -1.78
NDE1Q9NXR1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
NDE1Q9NXR1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC009229.4-201ENST00000623854 1947 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 RNU6-932P-201ENST00000391108 106 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 RNA5SP498-201ENST00000411342 120 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL139095.3-201ENST00000419672 1203 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 OSTCP5-201ENST00000425293 453 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL035407.2-201ENST00000454090 378 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 MTCO3P16-201ENST00000454456 754 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 RNU7-27P-201ENST00000459281 62 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC005532.2-201ENST00000467154 373 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC113420.1-201ENST00000507903 571 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC026726.1-201ENST00000512859 601 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 OR5AN2P-201ENST00000534535 896 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL133457.1-201ENST00000564251 987 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 UBE2FP2-201ENST00000566646 462 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 MTATP6P24-201ENST00000576835 677 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 VN1R87P-201ENST00000596706 487 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL445435.1-201ENST00000604232 665 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC013244.3-201ENST00000605614 388 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 RNU4-5P-201ENST00000607255 135 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC116651.1-201ENST00000609724 556 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 FRG1HP-204ENST00000617940 757 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 U7.8-201ENST00000619968 63 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC087385.3-201ENST00000620477 187 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC007342.8-201ENST00000623278 678 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AP003497.2-201ENST00000624220 967 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AL049536.1-201ENST00000625043 744 ntBASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDE1Q9NXR1 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC025031.4-201ENST00000621248 3271 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RNU6-543P-201ENST00000362576 108 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RNU1-87P-201ENST00000363727 170 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RNU6-98P-201ENST00000384173 107 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 MIR585-201ENST00000384887 94 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC136624.1-201ENST00000400791 413 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms