Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL603755.1-201ENST00000619504 163 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 AC067852.7-201ENST00000623270 535 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 FTO-223ENST00000640179 210 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 KARSP3-201ENST00000571212 1504 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 EIF2AP4-201ENST00000424793 1781 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5□□□□□ -1.61
VPS45Q9NRW7 AC099654.2-201ENST00000433031 1980 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5□□□□□ -1.61
VPS45Q9NRW7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5□□□□□ -1.61
VPS45Q9NRW7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS45Q9NRW7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC015813.6-201ENST00000624409 5808 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC120338.1-201ENST00000625074 1541 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 Y_RNA.126-201ENST00000363382 111 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 MTND4P22-201ENST00000413116 1169 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 PRELID3BP11-201ENST00000414230 479 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 TMBIM7P-201ENST00000418074 855 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AF186996.5-201ENST00000418098 904 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 PAICSP7-201ENST00000419829 962 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC233981.1-201ENST00000423224 461 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC073143.1-201ENST00000436316 395 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AL450263.2-201ENST00000439400 589 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 RSL24D1P3-201ENST00000449255 495 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 RN7SL817P-201ENST00000480777 288 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC073358.1-201ENST00000505671 684 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 RN7SKP276-201ENST00000516242 268 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC090312.1-201ENST00000580637 348 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 RN7SL690P-201ENST00000582087 240 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC022069.1-201ENST00000582910 658 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC115621.1-201ENST00000604653 858 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC009090.3-201ENST00000616553 565 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AL157770.1-201ENST00000623049 439 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 AC124312.6-202ENST00000623624 418 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 MIR6830-201ENST00000636015 70 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS45Q9NRW7 A2MP1-204ENST00000566278 4130 ntBASIC4.99□□□□□ -1.61
VPS45Q9NRW7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 DHX40P1-201ENST00000588725 1412 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC107081.3-201ENST00000612715 2034 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 OR4K15-201ENST00000305051 1216 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 RNA5SP479-201ENST00000364858 117 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC019155.1-201ENST00000382242 574 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MIR1193-201ENST00000408109 78 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 BX510359.2-201ENST00000417920 305 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC004690.1-201ENST00000418216 328 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC008280.1-201ENST00000418851 412 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 RPL7P53-201ENST00000421245 739 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL138785.1-201ENST00000425821 331 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MTCO1P3-201ENST00000429327 192 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC105402.2-201ENST00000438503 358 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 RPL7P31-201ENST00000450192 724 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 HMGN3P1-201ENST00000453847 193 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL133477.1-201ENST00000457472 514 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms